| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2833 |
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| Symbol | glnD |
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| ID | 5710684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2988886 |
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| End bp | 2991717 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268759 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_001534167 |
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| Protein GI | 159045373 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.141519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGCGC AGGCCGTCGA TGTCGCCCTG TCCCCGCCCC CGGCCAGCAC GGCGCCGGCG
GGTGGGATCG GCCTGGTCAA CCTGCCGCTC GTCGCCCCCG CCGACGCGAT CTTCGACACC
GCCACGATCC GGGCCGAGGC CGACCGGCTG AGCCAAGCGG AGGGCGCCTC CGCGAGCGCG
GTCCGCAAGG CGGTGGTCGG ATTGCTCAAG GACGCCCGCA AACAGGGCCT TGCCACGATC
CGGGCCGGGC TCGACGCCGC GCCGTTCAGT GCCCGCGAGA CCGTGCGCGC CTATGCCTAC
CTGACCGACG GGCTGGTCAC GACCGCCCTG CACGTGGCCC AGACCCACCT GCACCCGCTG
CCCACCCCGA CCGATGGCGA ACGGCTCAGC GTGCTGGCCG TGGGCGGCTA CGGGCGGGGC
GAGATGGCGC TCCATTCCGA TGTCGATCTG CTGTTCCTGA CGCCCTACAA GATCACGCCC
TGGGCCGAGA GCGTGATCGA GACCACCCTC TACATGCTGT GGGATCTCAA GCTGAAGGTC
GGCCATGCCT CGCGCACGGT GCGCGACTGC CTGCGGCTGG CGCGCGACGA CTACACGATC
CGCACCGCCC TGCTGGAAAA CCGGCTGCTC TATGGCGACG CGGAGCTCGC AGCCAAGCTG
CGCAAACGGC TGAAGTCCGA GCTCTTTCAG GGCACCTCCC AGGATTACAT CGAAGCCAAG
CTGGAGGAGC GGGAGCAGCG CCACACCCGC CAGGGCGGGC AGCGTTTCAT GCTGGAGCCC
AACGTCAAGG AAGGCAAGGG CGGGCTGCGC GACCTGCAAT CGCTCTACTG GATCGCGAAA
TACGTCCACG GGGTCGAAAC CGTCCAGGAG CTCGAGAACC TCGGCGTCTT CACCCACGAG
GAACGCGTGC TTTTCGATAC CGCGGAAACC TTCCTCTGGG CGGTGCGGTG CCACCTGCAC
ATCGTGTCGG GCCGGGCCAC GGACCAGCTG ACCTTCGACA TGCAGGTCGA GGTGGCCGAC
CGGCTGGGCT TTGCCGACCG GGACGGGCGG CGCGGGGTCG AGCATTTCAT GCAGCTCTAT
TTCCGCCACG CCACCAGCGT GGGCGACCTC ACCCGCATCT TCCTGACCGC GCTGGAGGCC
AGCCACGCCA AACGGGAGCC CCGCCTGATC GGGATGATCA AACGCTCCCG CCGCAAGAAG
GTGAAAGAGG CCTATGAAGT GCGCCAGAAC CGTCTGGCCA TCGCCGACCC CGAGACCTTC
TTCCGAGACC CGATCAACAT GCTGCGCATC TTCGAGGAAG CGCTGCGCAC CGGCTACCTG
CTGCACCCGG ACGCGATGCT GCGGATCAAG GCGAACCTGT CGCTGATCGA CAATCGCGTG
CGATCCAACA AGGAGGCCAA CCGGATCTTC TTCGACCTGC TGTTGAAACA CGGCAACCCC
GAGCGTGCCC TGCGCCGGAT GAACGAGCTT GGCGTGCTCG GCGCGCTGAT CCCCGAGTTC
CAGAAGATCG TCGCCATGAT GCAGTTCAAC GTCTACCACC AGTACACGGT GGACGAGCAC
ATCATCCAGT GCATCTCGAA CCTGGCCGAG ATCGAGCGCG GCGAGCTGGT CGAGAGCCTG
CCCGTGGCCA GTCGCATCCT CAAGCAGGGG GTGAACCGCA AGGTGCTCTA TACCGCGCTC
CTGCTCCATG ACATCGGCAA GGGTCGGCCC GAGGACCATT CGGTCGTCGG CGCACAGATC
GCCCGCCAGG TCGCGCCGCA CATGGGCTTC AACCCGCGCG ATTGCGAAAC CGTGGAATGG
CTGGTGCGCT ATCACCTGCT GATGTCCGAC ATGGCGCAGA AACGCGATCT GGCCGATCCG
CGCACCATCC GCGATTTTGC CAAGGCCGTG CGCACCCGCG AACGGCTCGA CCTGCTGACG
GTGCTGACCG TGTGCGATAT CCGCGGCGTC GGGCCCGGGA CCTGGAACAA CTGGAAGGCG
CAGCTGATCC GGTCGCTCTA CTGGATGACC GCCGAGGCGC TGGAAAACGG GCTTGAGGAT
CTGAACCGCG AAACCCTGGA GACCGACGCC AAGCGCGCCC TGCGCGCTGC CCTGTCGGAC
TGGCCGCGCA AGGACCTGCG GCTGGAGACC GGGCGCCATT ATGGCCCCTA CTGGCAAGGC
CTGCCCGGCG ATGCCCATGT CACGCTGGCG CATCTGCTGC GCGGGATCGA GGATGACCAG
GTCCGGCTCG ACCTGACGCT GGACGCGGAC CGCGACGTGA CCCGCGTGTC CTTCGCCATG
GCCGATCACC CGGGCATCTT CGCCCGGCTC GCGGGGGCCC TGGCCCTGGT TGGGGCCAAC
GTGGTGGACG CGCGCACCTA CACCACCAAG GACGGCTATG TCACCGCCTG TTTCTGGGTG
CAGGACGCCG ATGGCAAACC CTATGACGAG TCGCGCCTGC CCCGCCTGCG CAAGATGATC
GACAAGACCC TCAGCGGCGA GGTCGTCACC AGCCAGGCCC TGGTCAGCAA GGACAAGGTC
AAGAAACGCG ACGCCCAGTT CCGCTTCCCG ACCTCGATCA GTTTCGACAA CGAAGGCTCC
GAGATCTACA CCCTGATCGA GGTCGACACC CGCGACCGCC CCGGGCTGCT GTTCGATCTG
GCCAAGGCGC TGGCCGATGC CAATATCTAC GTCGCCTCCG CCCAGATCGC GACCTACGGG
GCGCAGGTGG TCGACACGTT CTACGTCAAG GACATGTTCG GCCTGAAGCT GCATGGCGAG
GCCAAGCAGA GGACCATCGA GAAGCGCCTG CGCGAGGCAG TGGAACACGG CGCGGAGCGC
GCGCGGACAT GA
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| Protein sequence | MPAQAVDVAL SPPPASTAPA GGIGLVNLPL VAPADAIFDT ATIRAEADRL SQAEGASASA
VRKAVVGLLK DARKQGLATI RAGLDAAPFS ARETVRAYAY LTDGLVTTAL HVAQTHLHPL
PTPTDGERLS VLAVGGYGRG EMALHSDVDL LFLTPYKITP WAESVIETTL YMLWDLKLKV
GHASRTVRDC LRLARDDYTI RTALLENRLL YGDAELAAKL RKRLKSELFQ GTSQDYIEAK
LEEREQRHTR QGGQRFMLEP NVKEGKGGLR DLQSLYWIAK YVHGVETVQE LENLGVFTHE
ERVLFDTAET FLWAVRCHLH IVSGRATDQL TFDMQVEVAD RLGFADRDGR RGVEHFMQLY
FRHATSVGDL TRIFLTALEA SHAKREPRLI GMIKRSRRKK VKEAYEVRQN RLAIADPETF
FRDPINMLRI FEEALRTGYL LHPDAMLRIK ANLSLIDNRV RSNKEANRIF FDLLLKHGNP
ERALRRMNEL GVLGALIPEF QKIVAMMQFN VYHQYTVDEH IIQCISNLAE IERGELVESL
PVASRILKQG VNRKVLYTAL LLHDIGKGRP EDHSVVGAQI ARQVAPHMGF NPRDCETVEW
LVRYHLLMSD MAQKRDLADP RTIRDFAKAV RTRERLDLLT VLTVCDIRGV GPGTWNNWKA
QLIRSLYWMT AEALENGLED LNRETLETDA KRALRAALSD WPRKDLRLET GRHYGPYWQG
LPGDAHVTLA HLLRGIEDDQ VRLDLTLDAD RDVTRVSFAM ADHPGIFARL AGALALVGAN
VVDARTYTTK DGYVTACFWV QDADGKPYDE SRLPRLRKMI DKTLSGEVVT SQALVSKDKV
KKRDAQFRFP TSISFDNEGS EIYTLIEVDT RDRPGLLFDL AKALADANIY VASAQIATYG
AQVVDTFYVK DMFGLKLHGE AKQRTIEKRL REAVEHGAER ART
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