Gene Dshi_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2813 
Symbol 
ID5710664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2968662 
End bp2969750 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content71% 
IMG OID641268739 
Producthypothetical protein 
Protein accessionYP_001534147 
Protein GI159045353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.106511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCAT GGGAACGGGA GGAGACCATG GAGATGATGT CCGGCACCAT GCTGGCCGCC 
CTGATCGGCC TTGCGGGGGG TCTTGCCCTG GGCGTGGCCG CCCGGGTGGG GCGGTTCTGC
ACCCTCGGGG CCATCGAGGA TGCGCTTTAC GGCGGCAGCG GCGCGCGACT GCGGATGTGG
GGCGCAGCAC TGGGGCTGAG CATTCTGGGC TGCGCGGGGT TAACCGGGGC CGGACTGCTG
GTTCCGGCGG AGGTGTTCCT GGTGCGCGAC GGGTTCTCGC CCGTGGCGGT GATTTTCGGC
GGGGCGCTTT TCGGGTTCGG CATGGCCCTG GCAGGCAATT GCGGCTACGG CGCGCTGGCG
CGGCTGGGCA ACGGCGATAT CCGGGCCTTC GTTCTGGTCG GGGTGCTGGG GGTGACGGCC
TATGCGGCGC TGTTCGGGCC GCTCTCGGGA CTGCGATTGT GGATCTTCGA GTTGCCGGTG
CTGCGCTTCG AAGCGGCGGT GACGCTGGAC GCCCTGGTTG GCGGCGTCCT GTCGGTGCCG
CCCTGGGCGG TGGGCGTCGG GGCCGGGATC GGCCTGTTGG CGGTGGCGCT GCACGGGGCC
GAGGCGCGCG GGCCGGTGCT GCGCTGGGGC GCGGTGGTGG CGGCGGCGAT CGTGTCGGGC
TGGGCCGGGA CCGGGTATCT GGCGCAAACG AGTTTCGAAG TGATCGGGGT ACGGTCGCAC
AACTTCTCGG CCCCCCTTGG CGAAACCCTG GCCTATTTCA TGCTGTCCGA CGTGCGGCCC
CTGTCCTTCG CGGTGGGCTC GGTCCTGGGC GTGGTCGCGG GGTCGGTGCT GGGCAGTCTG
TGGCTGGGAC AGTTCCGGTG GGAGGCCTGC GAGGACCCCC GCGAGCTCAA GCGGCAGCTG
ATGGGCGCGG TGTTCATGGG GTTCGGCGCG ACGCTCGCCC TGGGCTGTTC CATCGGCCAG
GGATTGTCGG CCTTCGCGAT CCTGACCGTG AGCGCGCCCC TGGCCGCGGC GTCGATCTTC
GCGGGGGCGG CGCTGGGCTT GCGGGTGCTG ATCGAGGGTT GGCCCGTGGG CGGGTCGCGC
GGGATCTAG
 
Protein sequence
MDPWEREETM EMMSGTMLAA LIGLAGGLAL GVAARVGRFC TLGAIEDALY GGSGARLRMW 
GAALGLSILG CAGLTGAGLL VPAEVFLVRD GFSPVAVIFG GALFGFGMAL AGNCGYGALA
RLGNGDIRAF VLVGVLGVTA YAALFGPLSG LRLWIFELPV LRFEAAVTLD ALVGGVLSVP
PWAVGVGAGI GLLAVALHGA EARGPVLRWG AVVAAAIVSG WAGTGYLAQT SFEVIGVRSH
NFSAPLGETL AYFMLSDVRP LSFAVGSVLG VVAGSVLGSL WLGQFRWEAC EDPRELKRQL
MGAVFMGFGA TLALGCSIGQ GLSAFAILTV SAPLAAASIF AGAALGLRVL IEGWPVGGSR
GI