Gene Dshi_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2809 
Symbol 
ID5710660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2966552 
End bp2967286 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content65% 
IMG OID641268735 
Productcytochrome c biogenesis protein 
Protein accessionYP_001534143 
Protein GI159045349 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.427201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACG TCTCGATCCT CGGTGCGGGC TTTGCGGGCC TGTTGTCCTT CCTGTCGCCC 
TGCATCCTGC CCATTGTTCC CTTCTATCTG TCCTACATGG CGGGCGTGGG CATGAACCAG
CTCGAACAGG ACACCGAGAT CACGCCCGCG ATCCGCACCC GCGCGGTGCT CTCGGCGCTG
GCCTTCTCGG CGGGGGTGAT CACGATATTC GTGGCGATGG GGGCAGGGGC CTCGGCCTTC
GGACAGGTGT TGGGGCAGTA TATGGACGTG TTGCGCTGGG TCGCGGCGGC CCTGATCGCC
ACCATGGGGC TGCATTTCCT GGGCGTGATC CGAATCGGCT TTCTCTATCG CCAGTTCCGG
ATGGAGGCCG GGTCCACCAC GAACATGAGC TTCCTGGGCG CCTACCTGAT CGGGCTGGCC
TTCGCCTTCG GCTGGACCCC TTGCGTCGGC CCGGTGCTGG CGGCCATCCT GTTCACCGTG
GCGACGGAGG GGACGGGCAT GACGCGCGGC ATGTTGCTGC TGACGGTCTA CGGGGTGGGC
ATGACGCTGC CCTTCGTGCT GGCGGCGCTG TTCATCGGCC CGTTCCTGCG CTGGATGCGC
GGCTTTCGCC GCCACCTCGG CCGGATCGAG AAGGCCACCG GCGTTTTCCT AGTGCTGTTC
GCCGTGCTGA TCGGCACCAA CAGCATGAAC ATCATCGCGA ACTGGATGCT GAACTATCTG
CCCGCCCTGG GCTGA
 
Protein sequence
MFDVSILGAG FAGLLSFLSP CILPIVPFYL SYMAGVGMNQ LEQDTEITPA IRTRAVLSAL 
AFSAGVITIF VAMGAGASAF GQVLGQYMDV LRWVAAALIA TMGLHFLGVI RIGFLYRQFR
MEAGSTTNMS FLGAYLIGLA FAFGWTPCVG PVLAAILFTV ATEGTGMTRG MLLLTVYGVG
MTLPFVLAAL FIGPFLRWMR GFRRHLGRIE KATGVFLVLF AVLIGTNSMN IIANWMLNYL
PALG