| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2766 |
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| Symbol | |
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| ID | 5713665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2927535 |
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| End bp | 2929334 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268691 |
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| Product | uncharacterized transporter |
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| Protein accession | YP_001534100 |
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| Protein GI | 159045306 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.14891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC TCGGCCTGAC CAGTACCCAA GACGCGATCC TCGCGCTTTG CGTGGTGGGG
GCGATGTTCG TGCTGTTCCT GCGCGAGATC TATCCGACCG AGGTGGTGGC GATCGGGGGG
GCGACGCTGC TCCTGGCGCT GGGGGTGTTG CCTTATGCGG ATGCGCTGGC GGTGCTGTCG
AACCCGGCGC CCTGGACCAT CGCGGCGATG TTCATCGTGA TGGGGGCGCT GGTGCGTACC
GGCGCGCTCG ACTGGTTCAC GTCGCTGGCC CAGGCCCGGG CAGAGGAGCG ACCCAAGCTG
TCGGTGGCGG TGCTGATTTC CTTTGTGGTG CTTTCCTCGG CGGTGGTGTC GAACACGCCC
GTCGTGGTCG TGATGATCCC GGTTTTCGTG CAACTGAGCC AGACGCTGGG CATCAAGGCG
TCGAAAATCC TGATCCCGCT GAGCTATGCC GCGATCATGG GGGGTACGCT GACCCTGATC
GGGACGTCGA CCAACCTGCT GGTGGACGGG GTGGCGCGGG CCAACGGGCT TGAGGCGTTC
ACCATGTTCG AGGTCACGCC CCTGGGCCTG ATCGTGGTGG GTTGGGGGAT GCTCTACCTG
ACGCTGCTGG GGCCGAAACT GCTGCCCAAT CGGGACAGTA TGGCGATGCT GTTGTCGAAC
AAGTCGAAGA TGAAATTCTT CACCGAGGTG GCGATCCCGG AGGACAGCGC GCTGATCGAC
CGGCCCGTGC GGGAGGTGGA GTTGTTCAAG CGCGAGGGTG TGCGGCTGAT CGATGTGCTG
CGTGGCGATG CGTCCCTGCG GCGCGACCTG AGCGAGGTGA CGTTGCAGGC GGGCGACCGG
GTGGTGCTGC GCACGGAGAT GGCGGAGCTT CTGAGCCTCA AGGCGGTCCG CTCGGTGGAG
ACTGCGCAGC CGCCGGAGTC GGCGGTGGAC AAGCTGAGCT CGGTGCAGAC CACGACCGTG
GAGGCGCTGA TCACGCCGGG CTGCGGGTTG GTGGGGCGGT CGCTCGGCCA GCTGCGTCTG
CGGCGGCGTT ACGGGGTCTA TCCCCTGGCC GTGCATCGGC GGAACCAGAA TATTGGGCGG
CAGCTTGACG ACCTGGTGGT GCGGGTGGGC GATACGCTGC TGCTGGAGGG CGCGCCGGCG
GACATCCAGC GGCTGGCGGC GGATGTGGGC CTGGTGGATA TCGCGCAGCC CTCGGCCCGG
GCGTATCGCC GCAAGCATGC GCCGATTGCC CTTCTGGCGT TGATCGCGGT CGTGGGGCTG
TCGGCGGCGG GGGTGGCGCC GATCCTGATG GCGGCGATCG TTGCGGTGGC GGTGGTGCTG
CTGACGAGGT GCATCGACGC GGAGGAGGCG TTTTCCTTCA TCGACGGGCG GCTTCTGGCG
CTGATCTTTG CGATGCTGGC GGTGGGCGCG GCCCTCGATG CCTCGGGCGC CGTGGCGCTG
ATCGTGAACG CGGTCGCGCC CAGCCTGATG GCCTTGCCGC CGTTCTTCAT CATCTGGGCG
ATCTACCTGC TGACCTCGGT TCTGACCGAA CTGGTGTCGA ACAATGCCGT GGCGGTGGTG
GTCACGCCCA TCGCCATCGG GCTGGCGACC GCGCTGGGCG TGGACCCGCG GCCCCTGGTG
GTGGCGGTGA TGATCGCGGC CTCGGCCAGT TTTGCCACCC CGATCGGGTA CCAGACGAAT
ACACTGGTCT TCGGCCCCGG CGGTTATCGA TTCACGGATT TCATGCGGGT GGGCATTCCC
CTGAATTTGA GTACAGGACT TATTGCCAGC GCGGTGATCC CGTTGATCTG GCCCCTTTAG
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| Protein sequence | MIDLGLTSTQ DAILALCVVG AMFVLFLREI YPTEVVAIGG ATLLLALGVL PYADALAVLS
NPAPWTIAAM FIVMGALVRT GALDWFTSLA QARAEERPKL SVAVLISFVV LSSAVVSNTP
VVVVMIPVFV QLSQTLGIKA SKILIPLSYA AIMGGTLTLI GTSTNLLVDG VARANGLEAF
TMFEVTPLGL IVVGWGMLYL TLLGPKLLPN RDSMAMLLSN KSKMKFFTEV AIPEDSALID
RPVREVELFK REGVRLIDVL RGDASLRRDL SEVTLQAGDR VVLRTEMAEL LSLKAVRSVE
TAQPPESAVD KLSSVQTTTV EALITPGCGL VGRSLGQLRL RRRYGVYPLA VHRRNQNIGR
QLDDLVVRVG DTLLLEGAPA DIQRLAADVG LVDIAQPSAR AYRRKHAPIA LLALIAVVGL
SAAGVAPILM AAIVAVAVVL LTRCIDAEEA FSFIDGRLLA LIFAMLAVGA ALDASGAVAL
IVNAVAPSLM ALPPFFIIWA IYLLTSVLTE LVSNNAVAVV VTPIAIGLAT ALGVDPRPLV
VAVMIAASAS FATPIGYQTN TLVFGPGGYR FTDFMRVGIP LNLSTGLIAS AVIPLIWPL
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