Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2654 |
Symbol | trxB |
ID | 5713552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2809223 |
End bp | 2810221 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268578 |
Product | thioredoxin reductase |
Protein accession | YP_001533988 |
Protein GI | 159045194 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCG AAACACGTCA CCTGAAGGTC CTGATCATCG GCTCCGGCCC GGCGGGCTAC ACGGCGGCGG TCTATGCCAG CCGCGCGATG CTGAACCCGG TGCTGGTCCA GGGCATCCAG CCCGGCGGCC AACTTACCAT CACCACCGAT GTGGAAAACT GGCCCGGCGA CAGCAGCGTC ATGGGCCCCG ACCTGATGGT GCGGATGGAA GAGCATGCAA AGGCCATGGG GACCGAGATC ATCGCCGACC ATATCAACCG GCTCGACCTG TCGTCCCGCC CCTTCACCGC CTATGGCGAC AGCGGCACGA TCTACAAGGC CGAGGCGCTG ATCCTGGCCA CCGGGGCGCA GGCGAAATGG CTCGGCCTGC CCTCGGAGGA ACACTTCAAG GGCTTCGGCG TCTCGGCCTG CGCCACCTGC GACGGATTCT TCTACCGCGG CAAGGAGGTC GTGGTGATCG GCGGCGGCAA CACGGCCGTC GAAGAGGCGC TGTTTCTGAC CAATTTCGCC TCCAAGGTGA CCCTGGTGCA CCGCCGCGAC AGCCTGCGCG CCGAAAAGAT CCTGCAGGAC CGACTGTTCA AGAACCCCAA GGTCGAGGTG ATCTGGGACC ACACGGTGGA GGAAGTGGTG GGCACCGACA CCCCGCGCGG CGTCGAAGGC GTGGTGATCA AGCACCGCGA CACCGGCGAG ACGCGCACCC TGCCCTGCGC GGGGTTCTTC GTGGCCATCG GCCATGCCCC GGCCTCCGAG TTGGTGATCG ACCAGCTCGA AACCCATATG GGCGGCTATG TCGTCACCGC GCCGGACAGC ACCGCGACCT CGATCCCGGG TGTCTTCGCC GCGGGCGACC TGACCGACCA CGAATACCGC CAGGCGGTGA CCAGCGCGGG CATGGGCTGC ATGGCCGCGC TGGAGGCCGA GCGGTTTCTG GCGGAAATGG ACGGCGAGAC CACCGCCGAT GCGGGCGTCT ACGCGGCCCC GGTGAACGCG GCGGAATAA
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Protein sequence | MSSETRHLKV LIIGSGPAGY TAAVYASRAM LNPVLVQGIQ PGGQLTITTD VENWPGDSSV MGPDLMVRME EHAKAMGTEI IADHINRLDL SSRPFTAYGD SGTIYKAEAL ILATGAQAKW LGLPSEEHFK GFGVSACATC DGFFYRGKEV VVIGGGNTAV EEALFLTNFA SKVTLVHRRD SLRAEKILQD RLFKNPKVEV IWDHTVEEVV GTDTPRGVEG VVIKHRDTGE TRTLPCAGFF VAIGHAPASE LVIDQLETHM GGYVVTAPDS TATSIPGVFA AGDLTDHEYR QAVTSAGMGC MAALEAERFL AEMDGETTAD AGVYAAPVNA AE
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