Gene Dshi_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2654 
SymboltrxB 
ID5713552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2809223 
End bp2810221 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID641268578 
Productthioredoxin reductase 
Protein accessionYP_001533988 
Protein GI159045194 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCG AAACACGTCA CCTGAAGGTC CTGATCATCG GCTCCGGCCC GGCGGGCTAC 
ACGGCGGCGG TCTATGCCAG CCGCGCGATG CTGAACCCGG TGCTGGTCCA GGGCATCCAG
CCCGGCGGCC AACTTACCAT CACCACCGAT GTGGAAAACT GGCCCGGCGA CAGCAGCGTC
ATGGGCCCCG ACCTGATGGT GCGGATGGAA GAGCATGCAA AGGCCATGGG GACCGAGATC
ATCGCCGACC ATATCAACCG GCTCGACCTG TCGTCCCGCC CCTTCACCGC CTATGGCGAC
AGCGGCACGA TCTACAAGGC CGAGGCGCTG ATCCTGGCCA CCGGGGCGCA GGCGAAATGG
CTCGGCCTGC CCTCGGAGGA ACACTTCAAG GGCTTCGGCG TCTCGGCCTG CGCCACCTGC
GACGGATTCT TCTACCGCGG CAAGGAGGTC GTGGTGATCG GCGGCGGCAA CACGGCCGTC
GAAGAGGCGC TGTTTCTGAC CAATTTCGCC TCCAAGGTGA CCCTGGTGCA CCGCCGCGAC
AGCCTGCGCG CCGAAAAGAT CCTGCAGGAC CGACTGTTCA AGAACCCCAA GGTCGAGGTG
ATCTGGGACC ACACGGTGGA GGAAGTGGTG GGCACCGACA CCCCGCGCGG CGTCGAAGGC
GTGGTGATCA AGCACCGCGA CACCGGCGAG ACGCGCACCC TGCCCTGCGC GGGGTTCTTC
GTGGCCATCG GCCATGCCCC GGCCTCCGAG TTGGTGATCG ACCAGCTCGA AACCCATATG
GGCGGCTATG TCGTCACCGC GCCGGACAGC ACCGCGACCT CGATCCCGGG TGTCTTCGCC
GCGGGCGACC TGACCGACCA CGAATACCGC CAGGCGGTGA CCAGCGCGGG CATGGGCTGC
ATGGCCGCGC TGGAGGCCGA GCGGTTTCTG GCGGAAATGG ACGGCGAGAC CACCGCCGAT
GCGGGCGTCT ACGCGGCCCC GGTGAACGCG GCGGAATAA
 
Protein sequence
MSSETRHLKV LIIGSGPAGY TAAVYASRAM LNPVLVQGIQ PGGQLTITTD VENWPGDSSV 
MGPDLMVRME EHAKAMGTEI IADHINRLDL SSRPFTAYGD SGTIYKAEAL ILATGAQAKW
LGLPSEEHFK GFGVSACATC DGFFYRGKEV VVIGGGNTAV EEALFLTNFA SKVTLVHRRD
SLRAEKILQD RLFKNPKVEV IWDHTVEEVV GTDTPRGVEG VVIKHRDTGE TRTLPCAGFF
VAIGHAPASE LVIDQLETHM GGYVVTAPDS TATSIPGVFA AGDLTDHEYR QAVTSAGMGC
MAALEAERFL AEMDGETTAD AGVYAAPVNA AE