| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2595 |
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| Symbol | |
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| ID | 5713493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2759653 |
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| End bp | 2761176 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641268519 |
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| Product | putative extracellular solute-binding protein |
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| Protein accession | YP_001533929 |
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| Protein GI | 159045135 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00975919 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACTTT TGACCCGCAT GACCGCCGCT GCCTTAATCG CGCTTGGCAC CGCCTTGCCA
GCCGCAGCAC AGGACGACAC GCTCACCATT TCAGTTACAT TCGGCCCCAC GGCCGAGGTG
CCTGACCCGC GTGCAGGCTA CAACGGCTGG ATGTCAAACC AGACTGGCGT CACAGAAACG
CTGATGGGCA TCGACTATGA CCTGAACCTC TATCCGCGCC TGGCAGAGAG CATTGAGCAA
ACCGCACCGA CGACCTGGCG TGTGACCTTG CGCGATGGTT TGACATTCCA CGATGGCTCT
CCCGTGACGG CACAGGCGGT CATCGATGCA ATTGCGCCGA TCTCGGATGA AGCGGACCCT
GCGTTCAACA AACGCATCGC CAGTGTGCTT GATCTGGCGG GCATGTCTGC AGATGGCGAC
CGCTTTGTGG TGTTCGAGAC CAACAGCCCG AACGCCGCTT TCCAATGGAG CCTGTCTGAT
CCGGGTGTCG CCATTCTCGG CGCGCCTTCA GACGCATTCC CAATCAACGC AACCGGCCCC
TACATCTTCC GTGAGGCTGT GCCGGAGCAG CTTTACCGCG TTGAAGCAAA CTCAGACTAT
CGCATGGGCG AGCCCGGCTT CGACGAAGTG CGGGTTGTCG CCTCACCTGA TCCAGCCACA
GCCTCACTGG CCTTTGAAGC CGGTGATGTG GATATGGTGA TCAACTACCC CGAAACCGAT
TTTGCACGTA TCCAGGAAAC GGGTGCGCAG GGCTTTACCG CTCCAACCGC CCGGCTTTAC
TTCTATTCGA TGAACACAGC GTCCGGCCCG CTGGCAAACC CGTTGATCCG GCAAGCCGTA
TCTTTGGCGA TTGACCGGGA CGGCATCGTT GAGGCGGTTC TTTCCGGCGT TGGCGGTGTG
CCAGCAGGCA CCATCTATCC GGAGGGCAAG AGCTGGGCCG CGGACATCGC GCCCACATAT
GATCCGGCAC GGGCAGAGGA ATTGCTTGCC GAAGCCGGAG CGGTCAAGCA GGGCGGCACC
TGGATGCTTG ATGGTGAACC GCTTGAGATC GAGATCCTGA CCTATTCGTC GCGTGCGGCG
CTGCCGCCCA CGGCGGAGAT TACGCAGGCC TTTCTGCAGC AGATCGGGAT CACAGCATCT
GTGCGTGTGG GCGAGTACGG CGCCAGCAAC GATGCGCTCA AAGCGGGTGA CGGCGACATG
TTCCTGCAAG CATGGGTGAT GTTGCCTCAG GGCGACCCCG GTTCGATCCT CGGCTTTCTA
TTGGCCAGCG ACGGCGGCTC GAACGCGGGC AACTACGCCA ATCCCGCGAT GGACGCCCTA
CTTGTCGAAG GTCAGACCAC GTTTGAACAA GCCGAGCGTG AGCGGATTTA CGATGAGGTT
CAGCAGATCA TTGCCACCGA TGTCCCGCTT ATCCCTGTCT TCCACGTGAG CCAGGCCGTT
GTGGCCCGTG CCGGTCTGAC CGGTTACCAG GTCCACCCGA CCGAGACCTA CTGGATCACC
CACGAGACAC GCTTCGCTGA ATGA
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| Protein sequence | MSLLTRMTAA ALIALGTALP AAAQDDTLTI SVTFGPTAEV PDPRAGYNGW MSNQTGVTET
LMGIDYDLNL YPRLAESIEQ TAPTTWRVTL RDGLTFHDGS PVTAQAVIDA IAPISDEADP
AFNKRIASVL DLAGMSADGD RFVVFETNSP NAAFQWSLSD PGVAILGAPS DAFPINATGP
YIFREAVPEQ LYRVEANSDY RMGEPGFDEV RVVASPDPAT ASLAFEAGDV DMVINYPETD
FARIQETGAQ GFTAPTARLY FYSMNTASGP LANPLIRQAV SLAIDRDGIV EAVLSGVGGV
PAGTIYPEGK SWAADIAPTY DPARAEELLA EAGAVKQGGT WMLDGEPLEI EILTYSSRAA
LPPTAEITQA FLQQIGITAS VRVGEYGASN DALKAGDGDM FLQAWVMLPQ GDPGSILGFL
LASDGGSNAG NYANPAMDAL LVEGQTTFEQ AERERIYDEV QQIIATDVPL IPVFHVSQAV
VARAGLTGYQ VHPTETYWIT HETRFAE
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