| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2576 |
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| Symbol | hisF |
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| ID | 5713474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2741620 |
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| End bp | 2742381 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268500 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001533910 |
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| Protein GI | 159045116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.283753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000166233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAAAA TCCGTGTCAT CCCCTGTCTC GACGTGGCCG ATGGGCGCGT GGTCAAGGGC
GTGAACTTCG TGGACCTCGT GGATGCGGGG GACCCGGTGG AATCGGCCAA GGCCTATGAC
GCGGCGGGGG CGGACGAGCT GTGCTTTCTC GACATCCACG CGACCAATGA GAACCGCGGC
ACGATGTATG ACCTGGCCAC GCGAACGGCG GAGCAATGCT TCATGCCGCT GACCATCGGC
GGCGGGGTGC GGACCACGGA GGATGTGCGC AACCTGCTTC TGGCGGGGGC GGACAAGGTG
TCGTTCAACT CGGCGGCCGT GGCGGATCCG GACGTGATCG CGCGGGCCGC CGACAAGTTC
GGCAGCCAGT GCATCGTCTG CGCGATAGAT GCCAAGACCG TGGCGCCGGG GCGGTGGGAG
ATATTCACCC ATGGCGGGCG CAAGCCAACG GGGATCGACG CGGTGGAATT CGCCAAAACG
GTCGTGGAAA AGGGGGCGGG AGAGATCCTG CTCACGTCGA TGGATCGGGA CGGGACCAAG
CAGGGCTTCA ACATAGCCCT GACGCGGGCC ATTTCGGATG CGGTGTCGGT GCCGGTGATC
GCGAGCGGTG GGGTTGGCAC GCTCGATCAC CTGGTCGAGG GCGTGACCGA GGGGGGGGCG
AGTGCCGTGC TGGCGGCGTC GATCTTCCAT TTCGGGGAGT TCACCATCCG CGAGGCGAAG
GAACACATGG CGGAGGCGGG GATCCCCGTG CGGTTGTCAT GA
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| Protein sequence | MLKIRVIPCL DVADGRVVKG VNFVDLVDAG DPVESAKAYD AAGADELCFL DIHATNENRG
TMYDLATRTA EQCFMPLTIG GGVRTTEDVR NLLLAGADKV SFNSAAVADP DVIARAADKF
GSQCIVCAID AKTVAPGRWE IFTHGGRKPT GIDAVEFAKT VVEKGAGEIL LTSMDRDGTK
QGFNIALTRA ISDAVSVPVI ASGGVGTLDH LVEGVTEGGA SAVLAASIFH FGEFTIREAK
EHMAEAGIPV RLS
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