| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2559 |
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| Symbol | |
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| ID | 5713456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2723112 |
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| End bp | 2724446 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268482 |
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| Product | AAA ATPase |
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| Protein accession | YP_001533893 |
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| Protein GI | 159045099 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000494228 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGAGA TCACCGGCTT TGCCGCGCTG GAACCGGAAT GGGACCGGAT CGAGGCGCTG
GCCCTGTGCC TGGTGGAATC GCGGCAAGGT CGGGAGCCTC CAGAGGCTCT TTTGGAGGCG
TTGACTGCGC TGCAGGTTGC AGTTTCCGCC CTGCGCACGG AGACGGCCCA TTGGCACGGT
CTGCCTCTCG ATGGTTTGAG CATGCTGGAG ATGGATATCC TCGCCGCGCT CGTGGCCGTG
GAGGTCCAGC CGCGGGTAGG CTGGCTTTTC CAGTCCTTGC AGAGTGCCGG ACCGCAGCCG
TCGCCCGCGT TGCTGCAGGA GCTGTTGGCC CTGCGTCCGG CCGAGACGGC CGGGTTGCAC
CGGGCAATGT CGCCGGAAGG GGCGCTGGTC AGCCGCCGGA TCATCAGCGT CGAGGCGCCG
GGGCTCTACG GCGCGCTGCA GATCGAGCCG AGGATGCTGG CGCGGCTTAT GGGCTGGCAG
CGTGTTCTGG CACCGCCGCC CGGCGCGACC CTAATCCGCG ATCCGGCGAG CTGGCAGGAC
CTGGTGCTGC CGGAGACGCA GATGCGCATG CTGCGTGAGT TCCTGATCTG GGTGCGGCAG
CGGTCGCGCG TGGTGACCGA CTGGGGCGGG CGCGATGTGG GCGGCCCGCT GGCGCTGTTT
TCGGGGCCGT CGGGGACGGG CAAGACTTTC ACCGCCTCGG TGCTGGCGGC GGAGCTGGGC
TGGCCGCTCT ACCGGGTCGA TCTGGGGATG GTCGTGTCGA AATATATCGG CGAGACCGAA
AAGAACCTCA ACGCGCTGTT CGATGCCGCC CATGGCGCGG AGATGGTGCT GCAATTTGAC
GAAGCCGACA GCCTTCTGGG CAAACGGGCC GAGGTTAAAG AGGCGCGCGA CCGGTACGCC
AATATGGAGG TGTCGCATCT GCTCAGCCGG ATCGAGCAGC ATCGCGGCCC CTGCATCCTG
ACCACCAACC TGCGGACCCA TCTGGACCCG GCGTTCATGC GGCGCTTCCA GGCGGTGATC
GAGTTTCCGC GCCCGGATCT CGCGGCGCGG GAGGCGCTCT GGGCGCGGCT TCTGCCTGCG
GGCGCGCCGA TCGCGGCGGA GGTGAAGCTG GCTGAGCTTG CCGCGGCGGT GCCTCTGACC
GGCGGGGGGA TCCAGAATGC GGCCTTGCAC GCGGCCTATC TGGCGGCGGA GGACGACACG
GAGATCGGGC TGGCACAGAT CGCAACGGCG ATCTGGCGCG AGTTGGGCAA GTCCGGCAAG
GCGACGGGCC ACAAGGAGCT GGGGCCGCTG GGCGCGCATC TGCCGCAGGC CGAGCGGCTG
GAGGGCGCAT CATGA
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| Protein sequence | MDEITGFAAL EPEWDRIEAL ALCLVESRQG REPPEALLEA LTALQVAVSA LRTETAHWHG
LPLDGLSMLE MDILAALVAV EVQPRVGWLF QSLQSAGPQP SPALLQELLA LRPAETAGLH
RAMSPEGALV SRRIISVEAP GLYGALQIEP RMLARLMGWQ RVLAPPPGAT LIRDPASWQD
LVLPETQMRM LREFLIWVRQ RSRVVTDWGG RDVGGPLALF SGPSGTGKTF TASVLAAELG
WPLYRVDLGM VVSKYIGETE KNLNALFDAA HGAEMVLQFD EADSLLGKRA EVKEARDRYA
NMEVSHLLSR IEQHRGPCIL TTNLRTHLDP AFMRRFQAVI EFPRPDLAAR EALWARLLPA
GAPIAAEVKL AELAAAVPLT GGGIQNAALH AAYLAAEDDT EIGLAQIATA IWRELGKSGK
ATGHKELGPL GAHLPQAERL EGAS
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