| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2545 |
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| Symbol | |
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| ID | 5713442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2701339 |
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| End bp | 2702202 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268468 |
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| Product | binding-protein-dependent transport system protein |
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| Protein accession | YP_001533879 |
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| Protein GI | 159045085 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.240068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.521676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACA TGACCAACAA CTTGTCCGAC AAGGACGATT TCGAAGACAC GGTCTGGGAA
CAGGAAGTGG CCTTCATCGA CAGCGTGCCG CGCTGGATCG CCATGACCTT CGTGTTCGTG
GTGTTCATCG GCACCTGGCA ATTGGTAACC AGCTTCGGGC TCGTCTCGCC GATCATACTG
CCGACGCCGT GGGAAACGCT CAAGGACATG ATCTTCGTCG GTCAAAACCT GCTTAGCGGA
GGCTACATGC TGGGGGCGCT CTGGATCACC GTGAAAGAGG TGATCTATGG CTTCGCGCTT
GCCATCGCGA TCGGGTTTTC CCTCGGCGTA CTCGTGGGCG AGACGGCGTT CGGCGAGAAG
GCGGTGATGC CTTATCTCGT GGCAATCGAC ACCATGCCCA AGGTCGCCTT CGCACCGCTC
TTCGTCGCCT GGCTCGGCTT CGGGATCGAG TCGAAGGTGG CGCTGGCGGC CTTCATCGCG
ACCTTCCCCA TCGTCGTGGG CACCGCGGCA GGGTTGCATG CCGCCGATGA GAACGCGCGG
ATGCTGTTCA AGACCATGGG TGCGAGCCGG ATGCAGACCC TGATCAAGAT GAAGCTGCCC
ACGGGCCTGC CGCAGATCTT CACCGGGCTC AAGATCGGCG CGGTCGGCGT CATGGCCGGG
GCGATTACCG GCGAATTCCT CGGCGGTGGC AAGGGCTTCG GCGAATTGAT CCGGGTGGCC
GCGTCGCAGC TCAATACGCC CCGCGTGTTC TCGCTGATCC TCTATCTCAG CCTCGTGGGG
CTGACGCTCT ACCTGCTGGT GCAGTGGACC CAGCGCCGCG TCGTGTTCTG GCAGAAAGAA
AGCGTGGGCT CCTACGATGC CTGA
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| Protein sequence | MTDMTNNLSD KDDFEDTVWE QEVAFIDSVP RWIAMTFVFV VFIGTWQLVT SFGLVSPIIL
PTPWETLKDM IFVGQNLLSG GYMLGALWIT VKEVIYGFAL AIAIGFSLGV LVGETAFGEK
AVMPYLVAID TMPKVAFAPL FVAWLGFGIE SKVALAAFIA TFPIVVGTAA GLHAADENAR
MLFKTMGASR MQTLIKMKLP TGLPQIFTGL KIGAVGVMAG AITGEFLGGG KGFGELIRVA
ASQLNTPRVF SLILYLSLVG LTLYLLVQWT QRRVVFWQKE SVGSYDA
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