| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2538 |
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| Symbol | |
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| ID | 5713435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2695338 |
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| End bp | 2696024 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641268461 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533872 |
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| Protein GI | 159045078 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.570188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAGT ACGTGATCGA CACACCGCCC TTGGTGGCCT TGCCAATCGC CGGGATGGAC
GCACTTTTTC CGGTGCGGCG TGTCTACTGC ATCGGGCGTA ACTATGCCGC CCATGCAATC
GAGATGGGGC ACAATCCCGA TCGCGAGCCG CCGTTCTTCT TCCAGAAAAA CCCGAACAAT
CTCGACCCTT CCGGTGAGTT CCCCTACCCG CCCCACACCT CGGATGTGCA TCACGAAGCC
GAAGTTGCGG TAATGTTGAA ATCCGGCGGC ACGAACATCC CCATCGACGA GGCCGAGAGC
CATATCTACG GCTATGCGCT ATCGTTGGAC ATGACGCGCC GGGATCTTCA GGGCGAGCAG
AAGAAGATGG GGCGTCCCTG GGAAATCGGC AAGGCGTTCG AGCGGTCGGC GCCCGTTGGT
CCGATCCACC GGATCGAAGA GACCGGCCCG CTGAACGAGG GCGCTCTGCG CCTGACCGTG
AACGGTGAGA CACGGCAGGA AGGCGACCTG AACCAGATGA TCTGGAAGGT TGCTGAGATG
ATTTCCTATC TTTCGGAATA TTTCGAGCTG GCGCCCGGGG ATGTCATCCT GTCGGGCACG
CCGTCCGGTG TGGCGGCGGT TGAGAGGGGC GATGTGATGG AGATCTCCGT CGAAGGGCTC
GGCAGCATGT CGGTCAAGGT CTTCTGA
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| Protein sequence | MSEYVIDTPP LVALPIAGMD ALFPVRRVYC IGRNYAAHAI EMGHNPDREP PFFFQKNPNN
LDPSGEFPYP PHTSDVHHEA EVAVMLKSGG TNIPIDEAES HIYGYALSLD MTRRDLQGEQ
KKMGRPWEIG KAFERSAPVG PIHRIEETGP LNEGALRLTV NGETRQEGDL NQMIWKVAEM
ISYLSEYFEL APGDVILSGT PSGVAAVERG DVMEISVEGL GSMSVKVF
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