Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2526 |
Symbol | |
ID | 5713423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2686988 |
End bp | 2688289 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268449 |
Product | putative sulfide quinone-rductase |
Protein accession | YP_001533860 |
Protein GI | 159045066 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.149353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGAA GACAATTCCT GACAGCGGCA GTCGCCGGGG GGGCTGCGGC CTCGCTCGTC TCGCCAAGCG CCGAGGCACA GGTCAGCCCC GTTCAGACAT CGGCGCGCAT CGTGATCATC GGCGCGGGGG CGGGTGGCAC CGCCCTGGCC AACCGGCTGG TGCGGCGGCT CGAAGGGGCG CAGATCACGT TGATCGACCC GCGCCGGGAG CACCTCTACC AGCCTGGCCT GACGCTGGTG GCGGCCGGTT TGAAACCGGG GGGATACGTG GTCTCGGACA CGGCAAAATG GCTTCCGGAG GGGGTGACAT GGCTGCCCGA GCGCGTGGTC GCCGTGGACG CGGAGGCTAA GACCGTCTCA ACCGAGAGCG GCGAGACGCT CGGTTACGAC TGGCTGGTCG TCGCACCAGG TCTGGTCCTC GATCACGACG CGATCGAGGG GTTCAGTCTG GACATGGTGG GCGAGAACGG GATCGGCGCG CTCTATGCCG GGCCCGAGTA TGCTGCGCGC ACCTGGGCAG CCGCTAGCCG TTTTGTCGAG GACGGCGGCA CGGGGCTCTT CACCCGTCCG TCGACCGAGA TGAAATGCGC TGGCGCGCCG CTCAAGCATA CGTTCCTGAT CGACGACATC GCGCGTCGGG CGGGCAATGC GGGGCGGATG AACATGGTCT ACGCCGCGCC GCAAGCCACG CTCTTCGGGG TGCCCATCGT GGCCGAGAAG GTCCGGATGC TGTTCGAGGA CCGCGGTGTC GACACCATGA TGAACCGCAC GCTGACCGGC ATTGATGCGG GCGCGAGACG GGCAACCTTT GCCACCGGGT CCGGCTCGGA AGAGGTGGAG TATGATTATA TCCACGTCGT CCCGCCGCAA CGTGCGCCGG ACTTCGTGCG CCGCTCGGGG CTGTCCTGGG CCGACAGATG GACCGACCAG GGCTGGGTCG AATGCGACAT GGCCACCCTG CGCCATCTGC GCTACCCCGA GGTTTTCGCG CTCGGCGATG TCGCCGGGGT GCCCAAGGGC AAGACCGCGG CGTCAGTCAA ATGGCAGGTG CCCGTGGTCG AGGATCACAT CGTTGCGGGC ATCGAGGGCC GGGAAGGCAC CGAGACCTAT GACGGCTACA CTTCCTGCCC GATGATCACC CGGATCGGGC GCGCCATGCT GGTGGAGTTC GACTACCACG ACAACCTCGT GCCGTCCTTC CCCGGCATGA TCGCGCCGCT CGAAGAGCTG TGGATCAGCT GGCTGATGAA GGAAGTGGCG CTGAAGGCCA CCTACAACGC GATGTTGCGT GGCCGAGCCT GA
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Protein sequence | MDRRQFLTAA VAGGAAASLV SPSAEAQVSP VQTSARIVII GAGAGGTALA NRLVRRLEGA QITLIDPRRE HLYQPGLTLV AAGLKPGGYV VSDTAKWLPE GVTWLPERVV AVDAEAKTVS TESGETLGYD WLVVAPGLVL DHDAIEGFSL DMVGENGIGA LYAGPEYAAR TWAAASRFVE DGGTGLFTRP STEMKCAGAP LKHTFLIDDI ARRAGNAGRM NMVYAAPQAT LFGVPIVAEK VRMLFEDRGV DTMMNRTLTG IDAGARRATF ATGSGSEEVE YDYIHVVPPQ RAPDFVRRSG LSWADRWTDQ GWVECDMATL RHLRYPEVFA LGDVAGVPKG KTAASVKWQV PVVEDHIVAG IEGREGTETY DGYTSCPMIT RIGRAMLVEF DYHDNLVPSF PGMIAPLEEL WISWLMKEVA LKATYNAMLR GRA
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