| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2485 |
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| Symbol | |
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| ID | 5713381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2637777 |
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| End bp | 2641214 |
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| Gene Length | 3438 bp |
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| Protein Length | 1145 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268408 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_001533820 |
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| Protein GI | 159045026 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TTCAGAAGAT CCTGATTGCC AATCGCGGCG AGATCGCCAT CCGGGTGATG
CGCGCGGCCA ACGAACTGGG CAAGAAAACG GTCGCGGTCT ATGCCGAGGA AGACAAGCTC
TGCCTGCACC GGTTCAAGGC AGACGAGGCC TACAAGATCG GCGAGGGGCT CGGCCCGGTC
GCGGCCTACC TGTCGATCGA CGAGATCATC CGCGTGGCGA AGCTCTCGGG CGCGGACGCA
ATCCATCCGG GCTACGGCCT GCTGTCCGAG AACCCGGATT TCGTGGATGC TTGCGTCGCC
AACGGCATCG CCTTCATCGG GCCCAGGGCC GAAACCATGC GCGCGCTCGG CGACAAGGCC
TCCGCGCGCC GGGTGGCGAT CGAGGCAGGC GTGCCGGTGA TCCCCGCCAC CGAGGTGCTG
GGCGACGACA TGGACAAGGT CCGCGCCGAG GCCGAGGCGA TCGGCTTTCC GCTGATGCTC
AAGGCGTCCT GGGGCGGCGG CGGGCGCGGG ATGCGCCCGA TCTTCGACCC CGACGAGGTG
GCCGATAAGG TGCGCGAGGG CCGGCGCGAA GCCGAAGCCG CCTTCGGCAA TGGCGAGGGC
TATCTGGAAA AGATGATCAC CCGCGCGCGG CATGTCGAGG TGCAGATCCT CGGCGACAGC
ATGGGCAACA TCTATCACCT GTGGGAACGG GACTGCTCGG TTCAGCGCCG CAACCAGAAG
GTCGTCGAAC GCGCCCCCGC GCCTTACCTG TCGTCCTCGC AACGCGAGCA GCTGTGCGAA
CTGGGCCGCA AGATCTGCGC CCATGTGAAT TACGAATGCG CCGGCACCGT CGAGTTCCTG
ATGGACATGG ATACCGGCGA GTTCTTCTTC ATCGAGGTGA ACCCCCGCGT GCAGGTCGAG
CATACCGTGA CCGAGGAAGT CACCGGCATC GACATCGTTC GCGCCCAGAT CCTGATCGCC
GAGGGCAAAT CCCTGGTCGA GGCCACCGGC ATGGCCAGCC AGTACGACGT GCAACTCAAC
GGCCACGCGA TCCAGTGCCG GATCACCACC GAAGACCCGC AGAACAACTT CATCCCCGAC
TATGGCCGGA TCACCGCCTA TCGCGGGGCG ACCGGCATGG GCATCCGGCT CGACGGCGGC
ACCGCCTATT CCGGCGCGGT GATCACACGC TACTATGACA GCCTGCTGGA AAAGGTCACC
GCCTGGGCCC CCACGCCCGA GGCGGCCATC GCCCGGATGG ACCGCGCCCT GCGCGAATTC
CGCATCCGGG GTGTCAGCAC CAACATCGCC TTCGTCGAGA ACCTGCTGAA GCACCCGACC
TTCCTCAACA ACCAGTATAC CACCAAGTTC ATCGACGAGA CCGAGGAGCT GTTCCAGTTC
CCCAAGCGCC GCGACCGGGC GACCCGCATC CTGCGCTACA TCGCGGATAT CTCCGTCAAC
GGACATCCCG AGACCGAAGG CCGCCCCAAG CCGCCCGCCA CGCCGCGCGC GCTCAGGGCC
CCCGCGCCGA AGGCCGCGCC CGCCCCCGGC ACCCGGACCC TGCTGGAGAA AAAAGGCCCG
CAGGCGGTGG CCGACTGGAT GGCAGCGCAG AAACAACTGC TGATCACCGA CACCACCATG
CGTGACGGGC ACCAGTCCCT GCTGGCCACG CGGATGCGGT CCATCGACAT GATCCGGGTG
GCGCCGAGTT ACGCCGCGAA CCTGCCGCAG CTCTTCTCGG TCGAATGCTG GGGCGGCGCG
ACTTTCGACG TGGCCTACCG GTTCTTGCAG GAATGCCCCT GGCAACGGCT CCGCGACATC
CGCGCGGCGA TGCCCAACGT GATGACCCAG ATGCTGCTGC GCGGCTCGAA CGGCGTGGGC
TATACCAACT ACCCCGACAA CGTGGTGCGC GCCTTCACCC TGCAGGCCGC CGAGAGCGGC
GTCGACGTCT TCCGCGTCTT CGACAGCCTG AACTGGGTCG AGAACATGCG CGTCGCCATG
GACGCGGTGC TGGAATCGGG CAAGGTCTGC GAGGGCGCGA TCTGCTACAC CGGCGACATC
CTCGACCCGA ACCGGGCGAA ATACGACCTG AACTACTACG TCACCATGGG CAAGGAGCTG
CGCGAGGCTG GCGCCCATAT CCTGGGGCTG AAGGACATGG CGGGGCTGCT GAAACCCGCC
TCCGCCCGGA TCCTGATCAA GGCCCTGAAG GAAGAGGTCG GCCTGCCCAT CCACTTCCAC
ACCCATGACA CCGCCGGTAT CGCCAGCGCC ACGATCCTGG CCGCCGCCGA GAGCGGCGTG
GACGCGGTCG ATTGCGCCAT GGACGCGCTG TCGGGCAACA CCTCCCAGGC GACGCTCGGC
ACGGTGGTCG AGGCGCTGCA ACACACCGAC CGCGACACCG GGCTCGACAT CAAGGCGGTG
CGCGAGATCT CCGACTACTG GGAAGCCGTC CGCGGCGAAT ACGCGGCCTT CGAGAGCGGC
ATGCAGGCCC CCTCCTCCGA GGTCTACCTG CACGAGATGC CCGGCGGACA GTTCACCAAC
CTCAAGGCCC AGGCCCGCTC GCTCGGGCTT GAGGAACGCT GGCACGAGGT CGCCCAGACC
TATGCGGATG TGAACCAGAT GTTCGGCGAC ATCGTGAAGG TCACGCCGTC GTCGAAGGTG
GTGGGCGACA TGGCACTGAT GATGGTCAGC CAGGGCCTGA GCCGCGCGGA TGTGGAGGAC
CCCGACCGCG ACGTGTCCTT CCCGGATTCG GTGATCGACA TGATGCGCGG CAATCTCGGC
CAGCCTGCGG GCGGGTTTCC CGAAGCGATC GTCGCCAAGA TCCTCAAGGG CGAGTCCCCC
AATACCGAGC GCCCGGGCAA GCATATCCCG CCCGTCGATC TCGAGAAGAC CCGGGCCGAT
CTCGCCGCGC AGCTGGAGGT GGATATCGAC GACGAGGACC TCAACGGTTA TCTGATGTAT
CCCAAGGTCT TCACCGATTA CATGACCCGC CATGCCGAAT ACGGCCCCGT GCGCACCCTG
CCCACGCGGA CGTTTTTCTA CGGCATGCAG CCCGGCGACG AGATCGAGGT CGAGATCGAC
CCGGGCAAGA CCCTGGTGGT GCGGATGCAG ACCGCGTCCG AGACCAACGA GGATGGCGAG
GTCAAGGTGT TCTTCGAGTT GAACGGCCAG CCCCGGCAAG TCCGCGTCCC CAACCGCAAG
GCCGCCGCGT CCGTGGCGAA ACGGCCCAAG GCCGAGCTGG GCAACCCCAA CCATGTGGGC
GCGCCGATGC CCGGTGTGGT GGCCTCGGTC GCGGTGCAGG CGGGGGCCTC GGTCAAGGAG
GGCGATCTGC TGCTGACCAT CGAGGCGATG AAGATGGAAA CCGGCATCCA TGCGGAGCGC
GACGCGGTGG TCAAGGCCGT CCACGTCACC CCCGCCGCCC AGATCGACGC CAAGGACCTG
TTGGTGGAGC TGGAGTGA
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| Protein sequence | MTDFQKILIA NRGEIAIRVM RAANELGKKT VAVYAEEDKL CLHRFKADEA YKIGEGLGPV
AAYLSIDEII RVAKLSGADA IHPGYGLLSE NPDFVDACVA NGIAFIGPRA ETMRALGDKA
SARRVAIEAG VPVIPATEVL GDDMDKVRAE AEAIGFPLML KASWGGGGRG MRPIFDPDEV
ADKVREGRRE AEAAFGNGEG YLEKMITRAR HVEVQILGDS MGNIYHLWER DCSVQRRNQK
VVERAPAPYL SSSQREQLCE LGRKICAHVN YECAGTVEFL MDMDTGEFFF IEVNPRVQVE
HTVTEEVTGI DIVRAQILIA EGKSLVEATG MASQYDVQLN GHAIQCRITT EDPQNNFIPD
YGRITAYRGA TGMGIRLDGG TAYSGAVITR YYDSLLEKVT AWAPTPEAAI ARMDRALREF
RIRGVSTNIA FVENLLKHPT FLNNQYTTKF IDETEELFQF PKRRDRATRI LRYIADISVN
GHPETEGRPK PPATPRALRA PAPKAAPAPG TRTLLEKKGP QAVADWMAAQ KQLLITDTTM
RDGHQSLLAT RMRSIDMIRV APSYAANLPQ LFSVECWGGA TFDVAYRFLQ ECPWQRLRDI
RAAMPNVMTQ MLLRGSNGVG YTNYPDNVVR AFTLQAAESG VDVFRVFDSL NWVENMRVAM
DAVLESGKVC EGAICYTGDI LDPNRAKYDL NYYVTMGKEL REAGAHILGL KDMAGLLKPA
SARILIKALK EEVGLPIHFH THDTAGIASA TILAAAESGV DAVDCAMDAL SGNTSQATLG
TVVEALQHTD RDTGLDIKAV REISDYWEAV RGEYAAFESG MQAPSSEVYL HEMPGGQFTN
LKAQARSLGL EERWHEVAQT YADVNQMFGD IVKVTPSSKV VGDMALMMVS QGLSRADVED
PDRDVSFPDS VIDMMRGNLG QPAGGFPEAI VAKILKGESP NTERPGKHIP PVDLEKTRAD
LAAQLEVDID DEDLNGYLMY PKVFTDYMTR HAEYGPVRTL PTRTFFYGMQ PGDEIEVEID
PGKTLVVRMQ TASETNEDGE VKVFFELNGQ PRQVRVPNRK AAASVAKRPK AELGNPNHVG
APMPGVVASV AVQAGASVKE GDLLLTIEAM KMETGIHAER DAVVKAVHVT PAAQIDAKDL
LVELE
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