Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2447 |
Symbol | |
ID | 5714103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2589923 |
End bp | 2591098 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641268370 |
Product | putative mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001533782 |
Protein GI | 159044988 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.549803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA TCAAATCCGT CCGTACGCGC GTCTGGAACT GGACCGGCCC GACCGTCCCG CCGCAGGGCA ATTTCTGCAC CAATGCGTCC GATGCGCTGT GGATCCAGGG CGACGCCATG GCCTCCTTCC GGTTCCACCA ATGGCTGACC TGCGAGGTCG AGACCGAGGA TGGCACCATC GGGATCGGCA ACGCGGCGCT GGCGCCCAAC GTCGTCAAAC AGGCCATCGA CGAATGGTAT GCGCCCCTGG TCATCGGCGA GGACCCGTTC GATTATGCCT ACCTGTGGGA AAAGATGTAT CGCCGCACCC ATGCCTGGGG CCGCAAGGGG ATCGGCATGA CCGCGATCAG TGCCATCGAC ATCGCGATCT GGGACCTGAT GGGCAAGCTG GTCGGCAAGC CGGTGTTCAA GCTTCTGGGC GGGCGCACCA AGGAGAAGAT CCCGGTCTAC TACTCCAAGC TTTACGCCGA CAGCATCCCC GCGATGCAGG CAGAGGCCGA GGAGGCGCAA AAGCATGGCT ACCAAGGCTA CAAGACCCGG TTCGGCTACG GTCCCAAGGA CGGCCCGGCG GGGATGCGCG AGAACCTCAA GCGCGTGGAG GCCCTGCGCG AGGTACTGGG CTATGACGTG GACCTGATGC TTGAGTGCTA CATGGGCTGG AACCTCGATT ACACCAAGCG GATGCTGCCC AAACTGGAGC GGTTCGAGCC GCGCTGGCTC GAAGAGCCGG TGATTGCCGA CGACGTGGCG GGCTATGCGG AGCTGAACGC CATGGGGATC GTGCCGATCT CGGGCGGGGA GCATGAATTC AGCGTCATGG GCTGTGCGGA GTTGATCAAC CGCAAGGCCG TCAGCGTGCT GCAATACGAC ACCAACCGGG TGGGCGGCAT CACCGCGGCG CAGAAGATCA ACGCCATCGC CGAGGCCGCG CAGATCATCG TCATCCCCCA TGCGGGCCAG ATGCACAACT ACCACCTGAC CATGGCCAAC ATGAACTGCC CCATCAGCGA GTATTTCCCT GTCTTCGACG TCGAAGTGGG CAATGAGCTG TTCTACTACA TCTTCGACGG CGATCCCGAG GCGGTGGACG GCTATCTGCA ACTGGATGAC GACACGCCCG GGCTCGGGAT CACCATCAGC GACGCTCACC TGAAACATTT CGAGATCACA GAATGA
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Protein sequence | MTKIKSVRTR VWNWTGPTVP PQGNFCTNAS DALWIQGDAM ASFRFHQWLT CEVETEDGTI GIGNAALAPN VVKQAIDEWY APLVIGEDPF DYAYLWEKMY RRTHAWGRKG IGMTAISAID IAIWDLMGKL VGKPVFKLLG GRTKEKIPVY YSKLYADSIP AMQAEAEEAQ KHGYQGYKTR FGYGPKDGPA GMRENLKRVE ALREVLGYDV DLMLECYMGW NLDYTKRMLP KLERFEPRWL EEPVIADDVA GYAELNAMGI VPISGGEHEF SVMGCAELIN RKAVSVLQYD TNRVGGITAA QKINAIAEAA QIIVIPHAGQ MHNYHLTMAN MNCPISEYFP VFDVEVGNEL FYYIFDGDPE AVDGYLQLDD DTPGLGITIS DAHLKHFEIT E
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