Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2412 |
Symbol | |
ID | 5714068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2549412 |
End bp | 2551100 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641268335 |
Product | putative chloride channel protein |
Protein accession | YP_001533747 |
Protein GI | 159044953 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.03983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACC CGCCCCAAGG CTTCTTTGCT CAGCAGCTGG GTGCATGGCG CAGCGCGCTT GCGCGCGCCT CCGTCACGAT CCGCCGCCAG GGCCCCAGCC AGATCCAGTT CTGGTTCATC GCGCTGGCCG TGGGCATCGC GGCGGGCTTT GCGGCGCTGA TCTTCCGCAA GGGGATTCAC TGGCTCCAGA CAATGGCCTA CGGCCACGAG GATGTGCGCG CGGTGATCGA CCACGCGGCG GGCCTGCCCT GGTACTGGCT GGTGATCGTG CCGACGCTGG GCGGGCTGGT GGTGGGGCTG ATCCTGCATT TTTTCACCGA TGACGGGCGG GTGCGGTCGG TCGCGGATGT GATCGAGGGC TCCGCGCTCT ACGAGGGCCG GGTCGAGAAG CGCGCGGGCA TCGCCTCGGC GGTCGCCTCC TGGATCACCC TGTCCACCGG CGGGTCGTCC GGGCGCGAGG GGCCGGTGGT CCACCTGGCC GCCGTGATCT CCAGCTGGGT GAGCAACCGC ATCCATGCCG ACGGGATCAC CGGGCGCGAC CTGCTCGGCT GTGCGGTTGC CGCCGCCGTG TCGGCCTCGT TCAACGCCCC CATCGCCGGG GCGCTCTTCG CGCTGGAGGT GGTGCTGCGC CATTTCGCGG TCCACGCCTT CGCGCCCATC GTCATCGCCT CGGCCGCCGG GACGGTGATC AACCGGCTGG AATTCGGCGA CGTGACCGAG TTTTCTCTGC CCGAGGCCAA CGCGCTGGCG TTCTATGTCG AACTGCCGGC CTTCCTGCTG CTGGGGCTCG TCTGCGGCCT GGTCGCCATC GTCTTGATGA AATCGGTGTT CTGGACCGAG GATTTCGCCA ACCACCTGCA GAAGGTCACC GGCCTTCCGC GCTACCTGCG CCCGGCTTTC GCGGGGGTGC TGCTGGGGCT GCTGGCGATC TGGTTCCCGC ATATCATCGG GGTCGGCTAC GAGACCACGA CCAACGCCCT GACCTCGCAA CTGCTGCTGC ACGAGGCGAT CGTGTTCGCC ATCCTCAAGG TGGTCGCGGT GGCGATCACC ATCGGCGGGC GCATGGGGGG CGGCATCTTC TCGCCCTCGC TCATGGTCGG CGCGCTGACG GGGCTGGCCT TCGGGATGAT CGCCACGGGC GTCTTCCCCG ATGTGTCAGG CTCCGAAGCG CTCTACGCGC TGGCGGGGAT GGGGGCGGTG GCCGCCGCGG TGCTGGGCGC GCCGATCTCG ACGACCCTGA TCGTGTTCGA GCTGACCGGC GACTGGCAGA CCGGGCTGGC GGTGATGGTG GCGGTGTCGC TCTCCACCGC GCTGGCGAGC CGGGTGGTGG ACCGGTCGTT CTTCCTGACA CAGCTGGAGC GGCGCAATGT CCATCTCGCC GCGGGGCCGC AAGCCTATCT GCTCGGTACC GTGCGGGTGG CCAAGATCAT GCGGCCCACC AGCCACCCCC GGGCCGCGCC CGAGGCGCGA TGTTGGGACC TGATCGGGGA CGGGGTCTAT CTGGACGGCA CCGCCAGTCT CGAGACGGCC ATGCCCGCCT TCGAGCGGGC CAATCATGAT TTCATCCCCG TGGTCAGCCT GGGCGGCGAG GGGGAGCCGC CCGAGCTGTG GGGCGCGCTC TTTCAGGTCG ATGCGCTGAA GGCGCTGAAC CGGGCGCTGG CCGAAACCGC CGCCGAGGAG CATTCCTGA
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Protein sequence | MSNPPQGFFA QQLGAWRSAL ARASVTIRRQ GPSQIQFWFI ALAVGIAAGF AALIFRKGIH WLQTMAYGHE DVRAVIDHAA GLPWYWLVIV PTLGGLVVGL ILHFFTDDGR VRSVADVIEG SALYEGRVEK RAGIASAVAS WITLSTGGSS GREGPVVHLA AVISSWVSNR IHADGITGRD LLGCAVAAAV SASFNAPIAG ALFALEVVLR HFAVHAFAPI VIASAAGTVI NRLEFGDVTE FSLPEANALA FYVELPAFLL LGLVCGLVAI VLMKSVFWTE DFANHLQKVT GLPRYLRPAF AGVLLGLLAI WFPHIIGVGY ETTTNALTSQ LLLHEAIVFA ILKVVAVAIT IGGRMGGGIF SPSLMVGALT GLAFGMIATG VFPDVSGSEA LYALAGMGAV AAAVLGAPIS TTLIVFELTG DWQTGLAVMV AVSLSTALAS RVVDRSFFLT QLERRNVHLA AGPQAYLLGT VRVAKIMRPT SHPRAAPEAR CWDLIGDGVY LDGTASLETA MPAFERANHD FIPVVSLGGE GEPPELWGAL FQVDALKALN RALAETAAEE HS
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