| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2390 |
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| Symbol | |
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| ID | 5714046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2524704 |
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| End bp | 2525351 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268315 |
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| Product | putative pyrimidine 5'-nucleotidase |
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| Protein accession | YP_001533727 |
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| Protein GI | 159044933 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.664306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCTG ATCGCTTTTC CCATGTCGAC ACCTGGGTGT TCGACCTCGA CAACACGCTC
TATCCGCCGC AGATGCGCCT CTTCGACCAG ATCGAGCGGC GCATGACGGC CTATGTGATG
GACGCGCTGG GTGTCTCCCG CGCCGAGGCG GACCGCCTGC GCCGGGAGTA CTGGGCGCGG
TTCGGCACGA CGCTGGCGGG GCTGATGGAG GTGCACGGGG TCGATCCCGG CCCCTACCTG
ACGGATGTGC ATGACATCGA CTTCACCGTG CTCGCCCCGG ATCCCGCCCT GGCGGCGCGG
CTCAGGGCCC TGCCCGGGCG CAAGATCGTC TACACCAACG GCTGCGCGCC CTATGCGGAA
AACGTGCTGC ACCATCGCGG GCTGAGCGGG ATTTTCGACG CGGTCTACGG GGTGGAACAC
GCAGGCTTCC GCCCCAAGCC GGAGCGCGCG GCCTTCGAGA CCGTGTTCGC CCAGGACGGC
GTGACACCCC GGCGCGCCGC CATGTTCGAG GACGATGTCC GCAACCTGCA TGCCCCACAT
GCGATGGGCA TGCAGACGGT CCATGTCGCG CCGGAGCCGG ACCCGGCCCC GCATATTCAC
CATCACACCG ATGACCTGAG CGGTTTTCTG ACCCGCGTCC TGCCCTGA
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| Protein sequence | MVADRFSHVD TWVFDLDNTL YPPQMRLFDQ IERRMTAYVM DALGVSRAEA DRLRREYWAR
FGTTLAGLME VHGVDPGPYL TDVHDIDFTV LAPDPALAAR LRALPGRKIV YTNGCAPYAE
NVLHHRGLSG IFDAVYGVEH AGFRPKPERA AFETVFAQDG VTPRRAAMFE DDVRNLHAPH
AMGMQTVHVA PEPDPAPHIH HHTDDLSGFL TRVLP
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