| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2371 |
|---|
| Symbol | pyrC2 |
|---|
| ID | 5714026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2503566 |
|---|
| End bp | 2504603 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641268295 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_001533708 |
|---|
| Protein GI | 159044914 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0418] Dihydroorotase |
|---|
| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.860009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA CCCTGCGCCG CCCTGATGAC TGGCACCTGC ACCTGCGCGA TGGCGCCATG
CTGAAAGGGG TCCTGCCGGA AACCGCACGG CATTTCGCCC GCGCGATCAT CATGCCGAAC
CTGGTGCCCC CCGTGGTGCG GGGCGCGGAT GCCCTCGGCT ATCGCGACCG CATCCTGTCG
GCGCTGCCGA AGGGCATGGC GTTTACCCCG CTCATGACGC TCTACCTGAC CGAAGAGACC
GACCCGGAGG ACGTCGCCAC CGCCCATGCG GACGGGCTGA TCACGGCGGT GAAGCTCTAC
CCGGCGGGGG CGACGACCAA CTCCGCGTCG GGCGTGCGGG ATTTCGACAA GGTGCGCGGC
GTGCTCGAAA AGATGGCCGA GATCGGCCTG CCCCTGTGTT TTCATGGCGA GGTCACGACG
CCCGAGGTCG ACATCTTCGA CCGGGAGGCG GTGTTCATCG ACACGGTTCT GGACCCGCTG
CGCCGGGCAA CGCCGGGGTT GCGCGTAACG ATGGAGCATA TCACCACCAA GGACGCGGTG
GACTACGTGA CCGGTGCCGA CGGCCATATC GGGGCCACGA TTACCACCCA TCACCTGATG
ATCAATCGCA ACCACATGCT GGTGGGCGGC ATCCGGCCCC ATTATTACTG CCTGCCGGTG
GTCAAGCGGG CGTCGCATCA GGCGGCCCTG CGCGCGGCGG CGATCTCGGG CAATCCGCGC
TTCTTCCTCG GCACCGACAG CGCGCCCCAT ACGGATGACA ACAAGGAGAC GTCCTGTGGT
TGCGCGGGCG TGTTCTCGGC CAGCAACACC ATGGCGTGCC TGGCCCATGT GTTCGAAGAA
GAGGGCGCGC TCGACAAGCT CGAAGGCTTT GCGTCGCTAC ATGGCCCCGC CCATTACGGG
CTGGAACCCA ACGAGGGCAC CATCACGCTG GAGCGGTCGG ACGACCCCGT CCCCTACCCC
GCGAAGATCG AAACCGGCGC GGGCCCCGTG ACCCTGTTCG ATCCGGGCCA CCCGCTGCAT
TGGCGGGTTC TGGACTGA
|
|---|
| Protein sequence | MRLTLRRPDD WHLHLRDGAM LKGVLPETAR HFARAIIMPN LVPPVVRGAD ALGYRDRILS
ALPKGMAFTP LMTLYLTEET DPEDVATAHA DGLITAVKLY PAGATTNSAS GVRDFDKVRG
VLEKMAEIGL PLCFHGEVTT PEVDIFDREA VFIDTVLDPL RRATPGLRVT MEHITTKDAV
DYVTGADGHI GATITTHHLM INRNHMLVGG IRPHYYCLPV VKRASHQAAL RAAAISGNPR
FFLGTDSAPH TDDNKETSCG CAGVFSASNT MACLAHVFEE EGALDKLEGF ASLHGPAHYG
LEPNEGTITL ERSDDPVPYP AKIETGAGPV TLFDPGHPLH WRVLD
|
|---|
| |