Gene Dshi_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2348 
Symbol 
ID5714003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2482067 
End bp2482429 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID641268272 
Producthypothetical protein 
Protein accessionYP_001533685 
Protein GI159044891 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02945] FeS assembly SUF system protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0990468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.537169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAG AGACCCCCCC GATGGAAGGT GCGCCGCTGA TCCGGCCTTC GAGCACGGAC 
CACCCCTTGC ACGAGCAGAT CGTCGAGGCC TGCCGATCGG TGTTCGACCC GGAGATCCCG
GTGAACATCT ATGATCTCGG CCTGATCTAC ACGATCGAGA TCAGCGACGA GGCCGAGGTG
GATATCATCA TGACCCTCAC GGCCCCGGGT TGCCCCGTGG CGGGCGAAAT GCCCGGCTGG
GTCGCCGAAG CGGTCGAGCC GCTGCCCGGC GTGAAGCAGG TCAACGTGGC CCTGACCTGG
GAGCCGCCCT GGGGCATGGA AATGATGTCC GACGAAGCCC GGCTCGAACT GGGCTTCATG
TAA
 
Protein sequence
MSVETPPMEG APLIRPSSTD HPLHEQIVEA CRSVFDPEIP VNIYDLGLIY TIEISDEAEV 
DIIMTLTAPG CPVAGEMPGW VAEAVEPLPG VKQVNVALTW EPPWGMEMMS DEARLELGFM