| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2345 |
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| Symbol | |
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| ID | 5714000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2478566 |
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| End bp | 2479228 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268269 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001533682 |
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| Protein GI | 159044888 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.499423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.134206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACTCG CACCCGATAC GCCGCCGCGC ACCAAGGTCG TTATCGTCGA TGATCATCCG
ATGGTCGCAG AGGGCATCGA GGCGATCCTT GAAACCTACG ACGACCTGCA GGTCATCGGA
CGCCTCTGCA ATGGGCGCGA GCTGGTCGAG CAGGTTGAAA CCCTTGCGCC GGACGTGATC
CTGCTGGACC TGAACATGCC CGAGATCAAC GGGCTGAGCG CGACCGAGAT GGTGCTGGAA
AAATGCCCCG ACACCCGGAT CCTGATCCTG TCGATGCATG ACAGCGCCGA ATACATCTCG
ACCGCCATGA GCCACGGCGC GCGGGGCTAT ATCCTCAAGG ATGTGCTTAC CGACGAGATC
CGCCTCGCCA TCGAGGCCGT GATGCGAGGC GAGACCTACA TGTGCACCGG CGCGTCGGCC
TCACTGGAGC CCAACACGGC CGACGGGCGC GAACCGCTGA CCTCGCGGGA GCAGACGATC
CTGCTGCAAC TGGCCTCGGG AAAGTCCAAC AAGGAAGTGG CGGCGACATT GGACATCTCG
GTCCGGACGG TCGAGACCCA TCGCAAGAAC ATCAAGCGCA AGCTGGGCAT ATCGTCCACC
GCGGGGCTGA CCCGCTACGC CATGGAGCAT GGCGTTTTGC AAGGCACCGG CGTCGATCTC
TGA
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| Protein sequence | MTLAPDTPPR TKVVIVDDHP MVAEGIEAIL ETYDDLQVIG RLCNGRELVE QVETLAPDVI
LLDLNMPEIN GLSATEMVLE KCPDTRILIL SMHDSAEYIS TAMSHGARGY ILKDVLTDEI
RLAIEAVMRG ETYMCTGASA SLEPNTADGR EPLTSREQTI LLQLASGKSN KEVAATLDIS
VRTVETHRKN IKRKLGISST AGLTRYAMEH GVLQGTGVDL
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