| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2251 |
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| Symbol | ribB |
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| ID | 5713904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2371565 |
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| End bp | 2372680 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268173 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_001533588 |
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| Protein GI | 159044794 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.51327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA GACTCAAGAC CGACTACTCA GATGCCATCT CTTCCGTGGA AGAGATCATC
GAGGATGCCC GCAACGGCCG GATGTTCATC CTCGTCGATC ATGAGGACCG CGAGAACGAA
GGGGATCTGG TGATCCCGGC GCAGATGGCG ACGCCGGATG CGATCAACTT CATGGCCACC
CATGGCCGCG GCCTGATCTG TCTGACCCTG ACCAGCGAGC GGATCGATCA GTTGGGCTTG
CCGTTGATGG CGTCCTACAA CTCCTCTCGC CACGAGACCG CGTTTACCGT GTCCATCGAG
GCGCGCGAGG GAGTGTCCAC GGGGATTTCG GCTGCCGACC GGGCGCGTAC CGTTGCGGTG
GCCATCGACG CGGCAAAGGG CGCCGCCGAT ATCGCCTCGC CCGGCCATGT CTTCCCGCTT
CGGGCGCGGG ATGGCGGGGT GCTGGTGCGC GCCGGACATA CGGAGGCGGC CGTGGATGTC
AGTCGCCTTG CCGGGCTCAA CCCGTCGGGC GTGATCTGCG AAATCATGAA CGACGACGGA
TCTATGGCGC GGTTGCCGGA CCTGATCGCT TTCGCGCAGC GGCACAACCT CAAGATCGGT
ACGATCTCGG ACCTGATTGC CTACCGGCGC CGCAATGACA ACCTGGTGAA GGTTACCAAG
GAAACCAAGG TCTCCTCGGA ATTCGGAGGC GACTGGGCAC TGAAGATCTA CACTGACAAG
ACCCAGGGGG CCGAGCATAT CGCGCTGATC AAGGGTGACA TCTCCACGCC GGAGCCGGTG
CTGGTGCGGA TGCATGCCCT CGATCCGATG CTCGATGTTG TGGGCACTGG CGGGCCCGGG
CGGGCCGGGG AGTTCGGGGA TGCGATGCGG ATCGTGGCGG ACGAGGGGCG CGGCGTGGTC
GTCTTGCTGC GTGATACCAC GATGAAAATC GCGGCCGGTG GCGAAGAGGT GTCGCCCCAG
ACCCTGCGCC AGTATGGCCT CGGCGCGCAG ATCTTGTCGT CGCTGGGACT GTCGGAACTG
ATCCTTCTGA CCAATTCACC GTCGCCCAAG GTGATTGGGC TGGAGGCTTA CGGCCTCACC
ATCACCGGCA CCCGAAAAAT ACCGATGCAG AGATAG
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| Protein sequence | MAERLKTDYS DAISSVEEII EDARNGRMFI LVDHEDRENE GDLVIPAQMA TPDAINFMAT
HGRGLICLTL TSERIDQLGL PLMASYNSSR HETAFTVSIE AREGVSTGIS AADRARTVAV
AIDAAKGAAD IASPGHVFPL RARDGGVLVR AGHTEAAVDV SRLAGLNPSG VICEIMNDDG
SMARLPDLIA FAQRHNLKIG TISDLIAYRR RNDNLVKVTK ETKVSSEFGG DWALKIYTDK
TQGAEHIALI KGDISTPEPV LVRMHALDPM LDVVGTGGPG RAGEFGDAMR IVADEGRGVV
VLLRDTTMKI AAGGEEVSPQ TLRQYGLGAQ ILSSLGLSEL ILLTNSPSPK VIGLEAYGLT
ITGTRKIPMQ R
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