| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2239 |
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| Symbol | |
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| ID | 5713892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2363027 |
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| End bp | 2363779 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268161 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001533576 |
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| Protein GI | 159044782 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCC GCACCCCTTC GTTTCGGCTG GACGGCCAGC GCGCCCTCGT CACGGGGGCA
TCGCGGGGCA TCGGACTGGG GTGCGCTGTC GCTCTGGCCG AGGCCGGGGC CCATGTGGTG
ATGGCCGCGC GTGGACAGGC CGAGTTGGAC GCCGCTGCCA CGGAGATGCG CGCCGAGGGC
TGGTCGGTGG AAACCGCCGT ACTGGACATC GCGGACCTGG ACGCGCAGGC CGAATTCTTC
GGCGCACAGG CGCCCTTCGA TTGCCTTGTG AATTCGGCAG GGCTGGCGCG CCATTCTCCG
GCACTCGATA CTCGCCCCGA GGATTTCGAT GCGGTGATGT CTGTCAACCT CCGTGCAGCC
TATTTCCTCG CCACCAACGC GGCCCGGACC ATGCCCGACG GCGGCAGCAT CGTGCAGATC
AGCAGCCAGA TGGGCCATGT GGGCGGGCTG GACCGCGCGG TCTACTGCGC CTCCAAGCAC
GGCGTCGAAG GCATGACCAA GGCCATGGCG CAGGAATTCG GCCCCCGCGG CATCCGCGTC
AACAGTCTGT GTCCGACCTT CATTCGCACA CCGCTGACCG AGGCGACCTT TGCCGACCCC
GAAAAGCGCG CCTGGATCAT GGGCAAGATC AAGCTGCCCC GCGTCGCCGA GATCGAGGAC
ATCATGGGCG CGGTCGTGTT CCTGTGCTCC CCGGCCAGCG CGATGGTGAC GGGAACCGGC
CTTCTGGTCG ATGGCGGCTG GACCAGCGGC TGA
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| Protein sequence | MLPRTPSFRL DGQRALVTGA SRGIGLGCAV ALAEAGAHVV MAARGQAELD AAATEMRAEG
WSVETAVLDI ADLDAQAEFF GAQAPFDCLV NSAGLARHSP ALDTRPEDFD AVMSVNLRAA
YFLATNAART MPDGGSIVQI SSQMGHVGGL DRAVYCASKH GVEGMTKAMA QEFGPRGIRV
NSLCPTFIRT PLTEATFADP EKRAWIMGKI KLPRVAEIED IMGAVVFLCS PASAMVTGTG
LLVDGGWTSG
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