| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2192 |
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| Symbol | uvrB |
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| ID | 5713845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2319332 |
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| End bp | 2321509 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268114 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001533529 |
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| Protein GI | 159044735 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC CCGTCCTGCA TGCCAGCGCC GATGATGTCC GCACCCGTCC CAAGCTCGAA
GGCGGTCGGA TGTTCCGGAT GGCGACCAGT TTCGAGCCTG CTGGGGACCA GCCGACCGCC
ATCGCGGAGC TGAGCGAGGG CGTGCGCAAC GGCGAACGCG ACCAGGTACT TCTGGGCGCG
ACCGGGACGG GCAAGACCTT CACCATGGCC AAGGTGATCG AGCAGACCCA GCGCCCCGCG
ATCATCCTCG CCCCGAACAA GACCCTCGCC GCGCAGCTCT ATGGCGAGTT CAAGGGGTTC
TTTCCCGACA ACGCGGTCGA ATATTTCGTC AGCTATTACG ACTACTACCA GCCCGAGGCC
TATGTGCCGC GCAGCGACAC CTATATCGAG AAGGAATCCC AGATCAACGA GCAGATTGAC
CGGATGCGCC ACTCGGCGAC CCGGGCCTTG CTCGAACGCG ACGACGTGAT CATCGTCGCC
TCGGTGTCGT GCATCTACGG CATCGGCTCG GTGGAGACCT ACGAGGCGAT GACCCAGGAC
CTGGTCGCGG GGCAGTCCTA TGACCAGCGC CAGATCATGG CGGATCTCGT GGCCCAGCAA
TACCGCCGCA ACGACGCCGG GTTCCAGCGC GGCTCTTTCC GGGTGCGCGG CGACAGCCTG
GAGATCTGGC CCGCCCACAT GGAGGACCGG GCGCTGAAAT TCTCGTTCTT CGGCGAAGAG
CTTGAAAGCA TTACCGAGTT CGACCCGCTC ACCGGCGAGA AGGCCGACAC CCTCGACCGC
ATCCGGATCT ATGCCAACTC CCACTACGTC ACGCCCCGCC CCACGCTCCA GCAGGCGATC
GTGTCGATCA AGAAAGAGCT GCGCATCCGC CTCGACCAGC TGGTCGCCGA GGGCAAGCTG
CTGGAGGCCC AGCGGCTTGA GCAGCGCACG AATTTCGACA TCGAGATGCT GGAGGCGACG
GGCGTCTGCA ACGGCATCGA GAACTATTCG CGCTACCTGA CCGGCCGCGC GCCGGGGGAG
CCGCCGCCCA CACTCTTCGA ATACATCCCC GACAACGCCA TCGTCTTCGC CGACGAGAGC
CACGTCTCGG TTCCGCAGAT CGGCGGCATG TACAAGGGCG ACTTCCGGCG CAAGATGACC
CTGGCCGAGC ACGGCTTCCG CCTGCCGTCT TGCATGGACA ACCGGCCCCT GAAATTCGAG
GAATGGGATG CCATGCGGCC CCAGTCGGTG TTCGTCTCGG CCACCCCCGC CGCGTGGGAG
CTGGAACAGG CCGGCGGCGT GTTCACCGAA CAGGTGATCC GCCCCACGGG CCTGCTGGAC
CCCCAGGTCG AAATCCGCCC GGTGGAGATG CAGGTGGACG ACCTGCTGGA CGAGGTCCGC
CGCGTCACCG CCGACGGGTT CCGCACACTG GTCACCACCC TGACCAAGCG GATGGCCGAG
GACCTGACCG AGTACATGCA CGAACAGGGC ATCAAGGTCC GCTACATGCA CTCCGACATC
GACACGCTGG AGCGCATTGA AATCCTGCGG GATCTCCGGC TCGGCGCCTT CGACGTGCTG
ATCGGGATCA ACCTGCTGCG CGAAGGGTTG GACATCCCTG AATGCGGTCT GGTGGCGATC
CTAGATGCGG ACAAGGAAGG CTTCCTGCGC TCGGAGACCT CGCTGGTGCA GACCATCGGC
AGGGCGGCGC GGAATGCCGA GGGGCGGGTG ATCATGTATG CCGACCGGAT CACCGGATCG
ATGGAGCGCG CGCTGGCCGA AACCAACCGC AGGCGCGCCA AGCAGATCGC CTATAACGAG
GAACATGGCA TCACGCCGGA GACGGTGAAG AAGAATGTCG AAGACGTGAT GGCCGGGCTC
TACCAGGGCG ACGTGGACAT GAACCGGGTC ACCGCCAAGG TCGAAAAACC GTTGCACGGC
GGGAACTTGG AGACGGTTCT TGAAGGGCTG CGGGCGGATA TGCGCAAGGC CGCGGAGAAC
CTGGAGTTCG AGGAGGCCGC GCGCCTGCGC GACGAGGTCA AGCGGCTGGA GGCGGTGGAT
CTGGCGATTG CGGACGACCC GCTGGCGCGG CAATCGGCGA TCGAGGCGGC GAGCGACGCG
GCCGTCAAGG CCCAGGGGCG CAGCACCGCG GGCCGCCCGG GCCAGCGCGG CGGGAACGTC
AAGCGGCGCA AAAAATAG
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| Protein sequence | MNQPVLHASA DDVRTRPKLE GGRMFRMATS FEPAGDQPTA IAELSEGVRN GERDQVLLGA
TGTGKTFTMA KVIEQTQRPA IILAPNKTLA AQLYGEFKGF FPDNAVEYFV SYYDYYQPEA
YVPRSDTYIE KESQINEQID RMRHSATRAL LERDDVIIVA SVSCIYGIGS VETYEAMTQD
LVAGQSYDQR QIMADLVAQQ YRRNDAGFQR GSFRVRGDSL EIWPAHMEDR ALKFSFFGEE
LESITEFDPL TGEKADTLDR IRIYANSHYV TPRPTLQQAI VSIKKELRIR LDQLVAEGKL
LEAQRLEQRT NFDIEMLEAT GVCNGIENYS RYLTGRAPGE PPPTLFEYIP DNAIVFADES
HVSVPQIGGM YKGDFRRKMT LAEHGFRLPS CMDNRPLKFE EWDAMRPQSV FVSATPAAWE
LEQAGGVFTE QVIRPTGLLD PQVEIRPVEM QVDDLLDEVR RVTADGFRTL VTTLTKRMAE
DLTEYMHEQG IKVRYMHSDI DTLERIEILR DLRLGAFDVL IGINLLREGL DIPECGLVAI
LDADKEGFLR SETSLVQTIG RAARNAEGRV IMYADRITGS MERALAETNR RRAKQIAYNE
EHGITPETVK KNVEDVMAGL YQGDVDMNRV TAKVEKPLHG GNLETVLEGL RADMRKAAEN
LEFEEAARLR DEVKRLEAVD LAIADDPLAR QSAIEAASDA AVKAQGRSTA GRPGQRGGNV
KRRKK
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