| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2188 |
|---|
| Symbol | rplI |
|---|
| ID | 5713841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2314176 |
|---|
| End bp | 2314805 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641268110 |
|---|
| Product | 50S ribosomal protein L9 |
|---|
| Protein accession | YP_001533525 |
|---|
| Protein GI | 159044731 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0359] Ribosomal protein L9 |
|---|
| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTCA TCCTTCTCGA ACGCGTGGCC AAGCTGGGCC AGATGGGCGA AGTCGTCGAC
GTCAAGCCGG GCTATGCTCG TAACTACCTG CTGCCGCAGG GCAAGGCGCT CAACGCGTCC
GAGGCCAACA TCGCGCAATT CGAAGCGCAG AAGGCCCAGC TCGAGGCGCG CAACCTGGAA
ACCAGGAAAG AAGCCGAGGC CATGGCCGAG AAGCTCGATG GACAGCAGTT CATCGTGATT
CGCTCCGCCT CCGACGCCGG CGCTCTCTAC GGCTCCGTGA CCACGCGGGA CGCGGCCGAG
GCTGCCACCG CCGACGGCTT CTCTCTCGAT CGCAAGCAGG TCTCGCTGTC CCGCCCGATC
AAGGAGCTGG GCCTGCACAC CGTGCACGTG ACCCTGCACC CCGAGGTCAC CGCCGATATC
GTGCTGAACG TGGCCCGCTC TGCCGAGGAA GCCGAGCTGC AAGCCTCCGG GAAATCGATC
CAGGAACTGG CCGCCGAAGC CGAGGCAGAG GCTGAATTCG AGATCGCCGA GTTGTTCGAC
GATATCGGCT CCGCTGCCTC CGAGGACAGC GATCTGGTCG AAACACCGGA AGATCGCGCC
ACGGAAGAGG CAGAAGACGA ACAGCCCTGA
|
|---|
| Protein sequence | MQVILLERVA KLGQMGEVVD VKPGYARNYL LPQGKALNAS EANIAQFEAQ KAQLEARNLE
TRKEAEAMAE KLDGQQFIVI RSASDAGALY GSVTTRDAAE AATADGFSLD RKQVSLSRPI
KELGLHTVHV TLHPEVTADI VLNVARSAEE AELQASGKSI QELAAEAEAE AEFEIAELFD
DIGSAASEDS DLVETPEDRA TEEAEDEQP
|
|---|
| |