Gene Dshi_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2184 
Symbol 
ID5713837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2311440 
End bp2312642 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID641268106 
Productputative cytochrome B561 
Protein accessionYP_001533521 
Protein GI159044727 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein
[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCA CCAACGCGCA CAACACTTAC GGCAGTGTCA GCAAGACCCT GCACTGGCTC 
ACGGTCGCGC TGATCCTCAC CCTGATCCCG CTGGGCATCA TTGCCAACGA CATGCCCTTC
GCTACCGGGG AGGAGCTGTC GCGCAAGGCA TTTGTCTTCT CGATCCACAA GACGCTCGGG
GTCACCGCCT TCTTCGCCGC CCTGGCCCGA GTCGCCTGGA TGCTGAGCCA ACCCAAACCC
GCCCCCCTGC ATCCCGAGCG GCGGCTGGAA ACCTTCGCCG CCGAAACCGT GCACTGGACC
CTCTATGGCA CGCTCCTGCT GGTGCCTCTC TCCGGCTGGA TCCACCACGC GGCCACCACC
GGTTTTGCGC CGATCTGGTG GCCCTTTGGT CAATCTCTGC CCTTCGTGCC GAAATCCGAC
ACGCTCGCCC ATACCTTCGC CAGCCTGCAC ATCATCTTCG AGCGGGTTCT CGTGATCGCG
CTGGTCCTGC ACGTCGCGGG CGCGCTCAAG CACCGCTTCT TCGACCGCGA CCTGACCCTG
CAACGCATGC TGCCCGGCGC AACCGCTGCC GCCCCCGCGA CCCCCGCCAA GCCCCACGGC
CCCGCCCTGC CGCTGTTGGG CGCTGCCGGG GCCTTCGCCG CGGCGCTGGC CGTGGGCGCG
GGGCTCGGGC TCTTCGCCCA TGACGACGCC GCCCCCCTGC CGCAGGCCGA ACTCGCCGAG
GTCGCCTCCG ACTGGACCGT CGAGGACGGC ACCCTCTCGA TCACCGTCAC CCAACTCGGC
GCACCGGTCA CCGGCACGTT CGAAGACTGG ACCGCCGCCA TCGCCTACGA CCCCGACAGC
CGCACGGGCG ATGTCACCGT CACCGTCGCG ATCCCCAGCC TCACCCTCGG CTCCGTCACG
TCCCAGGCGC TTGGGGCGGA ATTCTTCGCC GCCGACACCC ACCCCACCGC CACCTTCGCG
GCCGAGATCA CCGGCACCGA CGCGGGCCAT ACCGCCGAGG GCACCCTGAC CCTGAAAGGC
AGCACCGTGC CGGTCACCCT GCCCTTCACC CTGAACATCA CCGACGGCCT CGCCCGCATG
ACCGGCGAGA CGCAAGTCGC CCGGCTCGAT TTCGGCATCG GCACCGCCTA CCCGGACGAG
ACCAGCGTGG GTTTCACCGT CACCATCGCG GTGGACCTGA CCGCCCGCAG CACAGCCCCC
TGA
 
Protein sequence
MALTNAHNTY GSVSKTLHWL TVALILTLIP LGIIANDMPF ATGEELSRKA FVFSIHKTLG 
VTAFFAALAR VAWMLSQPKP APLHPERRLE TFAAETVHWT LYGTLLLVPL SGWIHHAATT
GFAPIWWPFG QSLPFVPKSD TLAHTFASLH IIFERVLVIA LVLHVAGALK HRFFDRDLTL
QRMLPGATAA APATPAKPHG PALPLLGAAG AFAAALAVGA GLGLFAHDDA APLPQAELAE
VASDWTVEDG TLSITVTQLG APVTGTFEDW TAAIAYDPDS RTGDVTVTVA IPSLTLGSVT
SQALGAEFFA ADTHPTATFA AEITGTDAGH TAEGTLTLKG STVPVTLPFT LNITDGLARM
TGETQVARLD FGIGTAYPDE TSVGFTVTIA VDLTARSTAP