Gene Dshi_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2149 
Symbol 
ID5713145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2278551 
End bp2278991 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content69% 
IMG OID641268071 
Productputative cupin 
Protein accessionYP_001533486 
Protein GI159044692 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.928679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG ACGAAATCAT CCGCCGCCTG GACCTTGCCC CCCATCCCGA AGGAGGCTGG 
TACCGCCAGA CCTGGGTCGC CGAGGCGGCC CCGGGTGCCC GTCCTGCGGG CACTGCCATC
TACTTCCTGC TCAAGACCGG GGAGCGAAGC CACTGGCACA AGGTGGACGC GACGGAGATC
TGGCTCTGGC ATGGGGGCGC ACCGCTGGAC CTGTGGATCG CCGCGACCAA GGCCGGTCCA
GCCCGGCATC ACCGGCTGTG CGCCGATCTG GACGCAGGTA GCCCACAGGC CATCGTGCCG
CCGGACCACT GGCAAGCTGC GACAAGCACG GCCACCACTG CAGATGGGTG GAGCCTGGTG
AGTTGCACCG TGTCACCGGG GTTCAGGTTC GAGGGCTTCA CCCTGGCGCC GGCAGGCTTC
GACATTCCGC GCGCGCCCTA G
 
Protein sequence
MTADEIIRRL DLAPHPEGGW YRQTWVAEAA PGARPAGTAI YFLLKTGERS HWHKVDATEI 
WLWHGGAPLD LWIAATKAGP ARHHRLCADL DAGSPQAIVP PDHWQAATST ATTADGWSLV
SCTVSPGFRF EGFTLAPAGF DIPRAP