Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2143 |
Symbol | |
ID | 5713139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2272576 |
End bp | 2273487 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641268065 |
Product | pirin like protein |
Protein accession | YP_001533480 |
Protein GI | 159044686 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.390987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTC GCCCCGTGAA ATCGACACAT ATGGCGCAAC CCACGATGGA GGGTGCGGGC GTACACCTGC ACCGCGTGTT CGGCTTCGGC GACCCGTCCG ACAGCGATCC CTTCCTGTTG CTGGACGATT TCCGCAACGA CGATCCGCAG GCCTATGAAA AAGGTTTCCC CTGGCACCCG CACCGGGGGA TCGAGACGAT CACCTATGTG CTGGAAGGTG AGGTGGACCA CGGTGACAGC CTCGGCAATC GAGGCACGCT TGGCGCAGGA TCGGTACAGT GGATGACCGC CGGGTCGGGG ATCCTGCACC AGGAAATGCC TCGCGGGAAT GCCGCCGGGC AGATGCATGG GTTTCAGTTG TGGGCAAATC TGCCCAGTGC GCAGAAGATG ACCACGCCGC GGTACCAGGA CATCGCGGGC AGCGACATTC CCGAAGTGAT CGAGGATGAC GGCACCCGGG CCCGCGTGAT CACCGGCAGT TTCTGGGGCG TGCGCGGCCC CGTGGACGGG ATCGCGGCCG AGCCCCAGTA TCTCGACATT TCCATGCCGC CAAACACGCG CCGCGTCCTT CCCGTGGACA CCTATGCCAA CACCTTTGCC TATGTGTTCG CGGGGGCGGC GCGGTTCCGC GACGCTTCCG CGCCCGTGGG GGTGCGCGTC GAGAAGGAGG TTGCCGGAGA GGAGATCAAC ATCCGTGACA TGTCGGGCAA TCGCACGCTG GTTCGCTTCG ACACTGGGGA CGAGATTTCG GTGACATCGG GCCCCGAGGG CGCCCGGTTC CTGTTGGTCT CTGGGCGCCC GATCGAGGAG CCCGTGGCGT GGCATGGGCC GATCGTGATG AACACCCGCG CCGAACTGCA GCAAGCGATG CGGGATCTCA ACAACGGCAC CTTCATCAAG CCCGTGCACT GA
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Protein sequence | MTFRPVKSTH MAQPTMEGAG VHLHRVFGFG DPSDSDPFLL LDDFRNDDPQ AYEKGFPWHP HRGIETITYV LEGEVDHGDS LGNRGTLGAG SVQWMTAGSG ILHQEMPRGN AAGQMHGFQL WANLPSAQKM TTPRYQDIAG SDIPEVIEDD GTRARVITGS FWGVRGPVDG IAAEPQYLDI SMPPNTRRVL PVDTYANTFA YVFAGAARFR DASAPVGVRV EKEVAGEEIN IRDMSGNRTL VRFDTGDEIS VTSGPEGARF LLVSGRPIEE PVAWHGPIVM NTRAELQQAM RDLNNGTFIK PVH
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