Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2132 |
Symbol | purF |
ID | 5713128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2262378 |
End bp | 2263904 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641268054 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001533469 |
Protein GI | 159044675 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.864953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCCACC CAGACACGCC CGCCGACCGG CCGCCCAAGA TGCCCCCGGC CCATCCGTTT GACTTCGACG CCGTGCGTTC CGATGACGGC GACGACAAGC TGCATGAAGA ATGCGGTGTG TTCGGCGTTG TCGGCCTGCC GGAGGCCGCG AATTTCGTGG CCCTCGGCCT GCACGCGCTG CAGCATCGCG GCCAGGAGGC CGGCGGCATC GTCAGCCATG CGCCGGGAAT CGGGTTCAAC TCCGCCCGAC GCTTCGGCTA TGTGCGGGAC AACTTCACCA AGGCGTCACT GATGGAAACC CTGCCCGGCC ATCTGGCCAT CGGGCATGTG CGATACTCCA CCGCCGGCTC CAAAGGGCAC ACCCAGATCC GCGATGTGCA GCCATTCTTC GGCGAGTTTT CCATGGGCGG CGCGGCGATC GCCCATAATG GCAACATCAC CAATGCCGAT GCCCTTCGTC GCGAACTGAT CGACCGCGGC TCGATCTTCC AGTCCTCCTC GGACAGCGAG TGCATCATTC ACCTGATGGC ACGGTCGCTG CAGCGCAACA TCCCCGAGCG GATGAAGGAC GCCCTGCGCC GCTGCGAAGG GGCGTTTTCT GTGGTCGCCA TGACCCGCAC CAAGCTGATC GGCGTACGTG ATCCGCTGGG CGTGCGCCCG CTGGTGCTGG GCAAGCTCGG CGATGGATGG GCGCTCAGCT CGGAGACCTG CGCGCTCGAC ATCATTGGGG CCGAGTTCGT GCGCGAGATC GAGCCGGGCG AGATGGTGGT AATCACCGAA AACGAAGGCG TGCAAAGCTA TTTCCCGTTC GAGCGCCGCG CCAGCCGCTT CTGCATCTTC GAGCATGTCT ATTTCTCCCG CCCGGACAGC ATCATCGGCG GCCGGTCGGT CTATGACACG CGCCGCATGA TCGGGGTGGA ACTGGCCAAG GAAGCGCCCG TGGACGCGGA CCTTGTGTGC CCGGTGCCGG ACAGTGGCAC GCCCGCCGCC ATCGGCTACA GCCAGGAGTC GGGCATTCCC TATGCCATGG GAATCATCCG TAACCAGTAT ATGGGCCGGA CCTTCATCGA GCCGACCGAG CAGATCCGCA ACATGGGCGT GCGTCTGAAG CTGAACGTCA ACCGCGCGCT GATCAAGGGC AAGCGGGTGA TCCTGGTGGA CGACTCAGTG GTGCGCGGCA CGACCTCGCG CAAGATCAAG GAAATGATCC TCGATGCGGG AGCCGCAGAG GTGCATTTCC GGATCGCGTC ACCCCCGACC TCCTGGCCAT GTTTCTACGG TGTGGACACG CCGGAGCGGG AGAAACTGCT GGCCGCCACC ATGTCCGAGG ACGAGATGTG CGCTCATCTG GGGGTCAACA GCCTGCGCTT CATCACGCTG GACGGGCTTT ACCGCGCCGC GGGCGTTCCC GAAGGCCGGG ACCCGGCGGC CCCTCGATAT TGCGACGCGT GTTTTTCAGG CGAATATCCG GTGGCCCCGT CGGACATGCT GGAGAAAGGG TTCCAGCTGC GCCCCGCGGC GGAATGA
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Protein sequence | MSHPDTPADR PPKMPPAHPF DFDAVRSDDG DDKLHEECGV FGVVGLPEAA NFVALGLHAL QHRGQEAGGI VSHAPGIGFN SARRFGYVRD NFTKASLMET LPGHLAIGHV RYSTAGSKGH TQIRDVQPFF GEFSMGGAAI AHNGNITNAD ALRRELIDRG SIFQSSSDSE CIIHLMARSL QRNIPERMKD ALRRCEGAFS VVAMTRTKLI GVRDPLGVRP LVLGKLGDGW ALSSETCALD IIGAEFVREI EPGEMVVITE NEGVQSYFPF ERRASRFCIF EHVYFSRPDS IIGGRSVYDT RRMIGVELAK EAPVDADLVC PVPDSGTPAA IGYSQESGIP YAMGIIRNQY MGRTFIEPTE QIRNMGVRLK LNVNRALIKG KRVILVDDSV VRGTTSRKIK EMILDAGAAE VHFRIASPPT SWPCFYGVDT PEREKLLAAT MSEDEMCAHL GVNSLRFITL DGLYRAAGVP EGRDPAAPRY CDACFSGEYP VAPSDMLEKG FQLRPAAE
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