| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2129 |
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| Symbol | |
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| ID | 5713125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2259500 |
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| End bp | 2260867 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268051 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001533466 |
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| Protein GI | 159044672 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.875143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC CCGCCACCCG TTTCATCTGC GCCGAGTGCG GCGCCGCCCA TTCCAAGTGG
TCCGGCCGGT GCGACGGCTG CGGGGCGTGG AATTCGATCT CCGAAGAGGT GCCCCTGAGC
GCGGGACCGT CGAAGAAGAG CCTCGGCGGG ATCCGGGGCA AGAAAGTGCC CCTGGGCGAT
CTGGCAAGCG AGGACGCGCC GCCGCCGCGC CGGACCTCGC AGCTGGAGGA GTTGGACCGG
GTGCTGGGCG GCGGGCTGGT GGATGCCTCC GCCGTGCTGG TGGGTGGCGA TCCGGGGATC
GGGAAATCGA CGCTCTTGCT ACAGGCGGCG GCGAGCTTTG CCCGGGCGGG GGCCAAGGCC
GTCTATATCT CGGGCGAAGA GGCGACGAGC CAGGTACGGA TGCGCGCGCG GCGGCTGGGA
CTGGCCGATG CGGCGGTCAA GCTGGGGGCC GAGACCAACT TGCGCGACAT TCTCACCACG
CTGGAGGCCG AGGCGCCGGA TCTCGCCATT CTCGATTCGA TCCAGACGCT CTGGTCCGAC
ACCGTGGACA GCGCGCCGGG CTCGGTGGCG CAGGTGCGTG CCTGCGCCCA TGAGCTGGTC
ACCTTTGCCA AGCGGTCGGG CACCAGCGTG ATCCTGGTGG GCCATGTGAC CAAGGAGGGA
CAGATCGCGG GGCCACGGGT GGTCGAGCAC ATGGTCGACA CGGTGCTTTA TTTCGAGGGC
GAGCGCGGGC ATCAGTTCCG CATTCTGCGC TCGGTCAAGA ACCGGTTCGG CCCGGCCGAC
GAGATCGGCG TGTTCGAAAT GACCGGCGCG GGGCTGGCCG AGGTCGCCAA CCCCTCGGCG
CTGTTCCTGT CGGGGCGCGA CGCGCCTGCC CCCGGCTCGG TGGTGTTCGC GGGCATCGAG
GGCACCCGGC CGGTACTGTG CGAATTGCAG GCGCTGGTCG CGCCTTCGGC GCTCGCCAAT
GCGCGGCGCA CGGTGGTCGG CTGGGACAGC GGGCGGCTGT CGATGATCCT GGCGGTGCTG
GAGGCGCGCT GCGGCATCCC GTTCACCGGG CTCGATGTTT ATCTCAATGT TGCGGGCGGC
TTGCGCATCG GCGAGCCGGC GGCGGACCTC GCCGTGGCCA CCGCGCTGCT CTCGGCGCGG
GAGGATATCG CCCTGCCGGC GGAGATGGTC GTCTTCGGCG AGATCAGCCT TTCGGGCGCC
CTGCGCCCCG TTGGCCAGAC CGAAAACAGG TTGAAAGAGG CCGCGAAACT TGGTTTCACC
AAGGCGCTTG CCCCGGCAGG CAGCAAGACG GGGACCACCT CGGGGCTGGA AACACGGCAG
ATGCCGGACC TGGCCACGGT GGTCGGGGAC ATGTTCGGGG CAGGATAA
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| Protein sequence | MAKPATRFIC AECGAAHSKW SGRCDGCGAW NSISEEVPLS AGPSKKSLGG IRGKKVPLGD
LASEDAPPPR RTSQLEELDR VLGGGLVDAS AVLVGGDPGI GKSTLLLQAA ASFARAGAKA
VYISGEEATS QVRMRARRLG LADAAVKLGA ETNLRDILTT LEAEAPDLAI LDSIQTLWSD
TVDSAPGSVA QVRACAHELV TFAKRSGTSV ILVGHVTKEG QIAGPRVVEH MVDTVLYFEG
ERGHQFRILR SVKNRFGPAD EIGVFEMTGA GLAEVANPSA LFLSGRDAPA PGSVVFAGIE
GTRPVLCELQ ALVAPSALAN ARRTVVGWDS GRLSMILAVL EARCGIPFTG LDVYLNVAGG
LRIGEPAADL AVATALLSAR EDIALPAEMV VFGEISLSGA LRPVGQTENR LKEAAKLGFT
KALAPAGSKT GTTSGLETRQ MPDLATVVGD MFGAG
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