| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2048 |
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| Symbol | |
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| ID | 5713043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2167769 |
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| End bp | 2169508 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267970 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533386 |
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| Protein GI | 159044592 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.715666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAACGC GTGCCAATTA CATCCTGATC GGGCTTTTCA CGCTGCTGGG CATCCTCGGC
ATGATGGCCT TTTTCCTGCT GTTCGCGCGG GTCGAGCTGG ACCGGCAATT CGCCTATTAC
GACATCCGGT TTTCCTCGGT CTCTGGGTTG AGCGAGGCGT CGGACGTACG GTTCAGCGGC
TTGCCCGTGG GGCAGGTGGT CGATGTACGG CTGGCCCCGG AGCAGGACGG CTCGATCGTC
GTGCGGGTTG AGGTGAATGC CGACACGCCG GTGCGCACGG ACAGTGTTGC GACGATCGAG
GCTCAGGGGG TCACGGGCGT GTCCTTCGTC GGGATCAGTG GGGGAACGCC GGACGCGCCG
CTTCTGGTGG CGGCCACCGA CGCGCAGGTG CCCGAGATCG AGGCCGGGCG CTCGGTGCTG
CAGACCCTGT CTGAGGACGC GCCCGAGCTG ATCACCGAGG CGCTGCAGAT CGTGCAGGAG
GTCAGCGCAC TGCTGACCGA CGACAATCGC AACCTGCTGC GCAATATCCT GGTCAATACC
GAGGCGGCCT CGGAAGAATT CGCCAGCGCG TTGGAGAATT TCTCCGGCGT GGCCGATACG
GTGAACGCCT TTGCCGACCA GATCAGCCGG TTCAACGCCA CGCTCGATAC CCTGACGGGA
GAGATCAACG ACGTGCTTTC CACGGCCGAC ACGACGCTGG CCTCCATCGG AGCCTTGTCG
GAGGAGACGC GCCGGATGGT CCTCGACGGT GAGGAGGTGC TGTCGACGCT CGACGATTCC
CTGGGGGCCG CGCAGACCTA TATCGAAGGT GATTTGGCCG GTGCGACCGA GGAGGCCCGG
GCATTGATGG CCGATCTGCG GGCGCAGGCC GACACCCTGG GCACCGAGGC TGCGGCGCTG
ATCGAGGGGT TCGGCGCGAC CGGCGACGTG GCCACGGCCC GGCTTACGGA GTTTGCGGGC
ACGCTGGCGG CGGTGGATCG GCTGGTCGCC TCACTGGAGG CAACCTCGGG CGAGGTCCAG
GTGGCCGTGC GGCGCATCGA CGGGCTGGTT GCGGAAGAGG GCGCACCGCT GCTGAGCGAG
ACGCGCGCGC TGGTCGCAAC GGCGCAGGCG GCGATGGAGG CGGTTAACGC GGTGGCGACC
GTGGACATGC CCGCCATCGT GGCCGATATC CGCGCCGCGA CCGACACCAC GACCCGGGTG
GTCGCCGAGG TAGGCGAGAA CCTGAGCGGC GCGTCGGGCC GGGTGGAGGC GCTGATCGTG
TCAGCGCACT CCACCCTCGC CGATGTCACC ACCACCTTCC GCAATGCCAA CGAGACCCTC
ACGGCGGTGA ACACCGCGAT GGAGACTGGC GACAGCGCCC TGCGCGCCGC CGAGAGCGCC
TTTACCTCCG CCGATCGGGT GATGAGCGAG GATCTCGACG GGGTCATCGC CGCGCTGGAG
AGCACGCTTG GCTCGCTGAC CGGGGCGGTG GACAGCGTAG CAGAGGACCT GCCGCTGATC
AGTTCGGATC TGCGCAGCGC CAGCGATGCC GCCGCGCGGG CCTTTGCCGA GGTGGAGGCG
CTGGCCGAGG CGGCCGGGCC CAGGCTGGAG ACTTTCGCGA CCACCGGCCT GCCGCTTTAT
TCCCGGCTCG CGCAGGAAGC GCGCGTGCTG GTCGAAAACC TCGACCGGCT GACCAACCAG
ATCAGCCGCG ATCCCGCGCG GTTCATCCTC AACCCCAACA CCCCGGAATT CAGAAGGTAG
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| Protein sequence | METRANYILI GLFTLLGILG MMAFFLLFAR VELDRQFAYY DIRFSSVSGL SEASDVRFSG
LPVGQVVDVR LAPEQDGSIV VRVEVNADTP VRTDSVATIE AQGVTGVSFV GISGGTPDAP
LLVAATDAQV PEIEAGRSVL QTLSEDAPEL ITEALQIVQE VSALLTDDNR NLLRNILVNT
EAASEEFASA LENFSGVADT VNAFADQISR FNATLDTLTG EINDVLSTAD TTLASIGALS
EETRRMVLDG EEVLSTLDDS LGAAQTYIEG DLAGATEEAR ALMADLRAQA DTLGTEAAAL
IEGFGATGDV ATARLTEFAG TLAAVDRLVA SLEATSGEVQ VAVRRIDGLV AEEGAPLLSE
TRALVATAQA AMEAVNAVAT VDMPAIVADI RAATDTTTRV VAEVGENLSG ASGRVEALIV
SAHSTLADVT TTFRNANETL TAVNTAMETG DSALRAAESA FTSADRVMSE DLDGVIAALE
STLGSLTGAV DSVAEDLPLI SSDLRSASDA AARAFAEVEA LAEAAGPRLE TFATTGLPLY
SRLAQEARVL VENLDRLTNQ ISRDPARFIL NPNTPEFRR
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