| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1986 |
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| Symbol | icd |
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| ID | 5712980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2099648 |
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| End bp | 2101816 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267909 |
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| Product | monomeric isocitrate dehydrogenase |
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| Protein accession | YP_001533326 |
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| Protein GI | 159044532 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.305088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC AAACGAACCC GGATATCGTC TATACCACCG TGGACGAAGC GCCCGAACTG
GCGAGCGCGT CGCTCTTGCC GATCATCCAG GCCTTCGCCG CCCCTGCGGG CGTGTCGGTG
GGCAAGAAGG ATATCAGCCT GGCCGCCCGC ATCCTGGCCG CGGTGGCGGG CGCGCCGGAT
CACCTGGCCG AGCTGGGCGG GCTGGTCAAG ACGCCCACCG CCAACGTGAT CAAGCTGCCC
AACATCTCCG CCTCCCAGCC GCAGCTCGAT GCCGCCATCG CCGAGTTGCA ATCCCAAGGC
CACGACATCC CCGCCTATCC GGCCAACCCG ACCACCCCGG AAGAGGAAAG GATCAAGGCC
GCCTATGACG CGGTCAAGGG CTCGGCGGTG AACCCCGTGC TGCGCGAGGG CAATTCCGAC
CGGCGCGCGG CCCAGGCGGT GAAGAACTAT GCCCGGGCCA ACCCGCACCG GATGGGCGAA
TGGACCGCCG ACAGCAAGAC CACCGTGATG ACCATGGGCG CGCGGGATTT CTGCAGCAAC
GAGACCTCGA CCACCATCAC CGCGGCCCAG GCCGGGCCCG CGCGGATCGA ATTCGTGGGC
GCGGACGGCA CCACGGTGCT GAAGGAGGGC GTGCCGCTCG ACGCGGGCAC TGTGTGCGAT
GCGACCTTCA TGTCCGTCGC CGCCCTGCGC GACTTCCTGG CCGAGACGAT CTCGGCCACG
AAAGAGGCGG GCGTGCTGTG GTCGATCCAC CTGAAAGCCA CGATGATGAA GGTCTCCGAC
CCGATCATCT TCGGCCACGC GGTGGAGGTG TTCTTTGCCG AGCTGTTCGA GAAACACCCG
GAGCTGACCG GCGCGCGCGG CGGGCTGGGC ACGGTGCTGA ACGGCGCCTC GGACGCAGTG
CTGGCCGATT ACCAGGCGGT GCTGGACAAG CAGCCGCCGA TGTACATGGT CAATTCCGAC
ACCGGCCTGA CCAACCTGCA CGTGCCCTCG GACGTGATCA TCGACGCCTC CCTGCCCGCG
ATCATCCGCG CGGGCGGCAA GGGCTGGGGC CCGGATGGCA ACGAGGCCGA CACCGTCTGC
GTCATCCCCG ACAGCAGCTA TGCGCCCGTC TATGCCGAGA CGATCGAGTT CTTCAAGAAG
CACGGCAAGC TCGATGTCAC CACCGCCGGG ACGGTGCAGA ATCTCGGGCT GATGGCGCAG
AAGGCCGAGG AATACGGCTC CCACCCGACC ACGTTCGAGG CCCCTGCCGA CGGCACCATC
CGCATGATCG CGGCCAATGG CGATGTGCTG CATTCCCACG AGGTTGAGAA GGGCGACATC
TGGCGCTCCT GCACCGCCAA GAAGGCGCCG ATCGAGGACT GGGTCAAGCT GGCGATCGAG
CGGCAGAAGC TCACGGGCTA TCGCGCGATC TTCTGGCTGA ACGCCGACCG CGCCCATGAC
GCCGAACTGA TCAAGCATGT CACCCCGATC CTGGAGGCCG CGGGCGTGGC CGACAAGTTC
GAGATCATGT CGCCCGCCGA GGCCACGGTC GCGAGCCTGG AGACGATCAC CAAGGGCGAG
AACACCATCG CCATCACCGG CAACGTGCTG CGCGACTACC TGACCGACCT CTTCCCGATC
CTGGAGCTGG GCACCTCGGC CAAGATGCTG TCCATCGTCA AGCTGATGCA GGGCGGCGGG
CTGTTCGAGA CCGGAGCGGG CGGCTCCGCG CCCAAGCATG TGCAGCAGTT GCAGGCCGAA
AACCACCTGC GCTGGGACAG CCTGGGCGAG TTCTGCGCCC TGGGCGAGAG CTTCAAGTTC
CTGGCCCAGA GCCGGGACAA CGCCAAGGCG GGCGTGCTCG GCGACGCGGT GGAGGCGGCG
ACCCAGAAGG TGCTGGAATT CGACCGCTCC CCGGGTCGCA AGGTGGGCCA GCCCGACAAC
CGGGCGAGCC ATTACTGGTT CGCGCGCTAT TGGGCCGAGG CCCTGGCGGC CCAAGACAAG
GACGCCGAGA TCGCGGCGCA TTTCGCGCCC ATCGCGGCAA AGCTGGCCGA GAACGAGGAG
ACCATCCTGG CCGAGTTGGC CGCGGGCGCG GGCACACCGG CGGATACGGG CGGCTACTAC
CATAACGATC CCGCCAAGGT CGCGGCGGTC ATGCGGCCCA GCCCGACCCT GAACGCGATC
ATCGGCTGA
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| Protein sequence | MADQTNPDIV YTTVDEAPEL ASASLLPIIQ AFAAPAGVSV GKKDISLAAR ILAAVAGAPD
HLAELGGLVK TPTANVIKLP NISASQPQLD AAIAELQSQG HDIPAYPANP TTPEEERIKA
AYDAVKGSAV NPVLREGNSD RRAAQAVKNY ARANPHRMGE WTADSKTTVM TMGARDFCSN
ETSTTITAAQ AGPARIEFVG ADGTTVLKEG VPLDAGTVCD ATFMSVAALR DFLAETISAT
KEAGVLWSIH LKATMMKVSD PIIFGHAVEV FFAELFEKHP ELTGARGGLG TVLNGASDAV
LADYQAVLDK QPPMYMVNSD TGLTNLHVPS DVIIDASLPA IIRAGGKGWG PDGNEADTVC
VIPDSSYAPV YAETIEFFKK HGKLDVTTAG TVQNLGLMAQ KAEEYGSHPT TFEAPADGTI
RMIAANGDVL HSHEVEKGDI WRSCTAKKAP IEDWVKLAIE RQKLTGYRAI FWLNADRAHD
AELIKHVTPI LEAAGVADKF EIMSPAEATV ASLETITKGE NTIAITGNVL RDYLTDLFPI
LELGTSAKML SIVKLMQGGG LFETGAGGSA PKHVQQLQAE NHLRWDSLGE FCALGESFKF
LAQSRDNAKA GVLGDAVEAA TQKVLEFDRS PGRKVGQPDN RASHYWFARY WAEALAAQDK
DAEIAAHFAP IAAKLAENEE TILAELAAGA GTPADTGGYY HNDPAKVAAV MRPSPTLNAI
IG
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