| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1933 |
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| Symbol | ileS |
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| ID | 5712927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2019318 |
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| End bp | 2022293 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267858 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_001533275 |
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| Protein GI | 159044481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.183113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00000504744 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGCGCCG ACACGCCGAC TGCGAACCAG TACAAAGACA CGCTGAACCT GCCGAAGACC
GATTTCCCGA TGCGCGCGGG CCTGCCCAAG CGGGAGCCCG AATGGCTCGC CCGGTGGGAG
GAGATGGGGA TCTACGACCG CTTGCGCGAG AAGGCGAAGG CCGAGACGCG GCCTGCCTTC
ACGCTCCATG ACGGGCCTCC CTATGCCAAC GGGAACCTGC ATATCGGCCA CGCGCTGAAC
AAGATCCTCA AGGACATGGT GGTTCGGTCC CAGCAGATGA TGGGCCGCGA CGCGCGGTAC
ATCCCCGGCT GGGACTGCCA CGGCCTGCCG ATCGAGTGGA AGATCGAGGA GAAATACCGC
GCCAAGGGCC GCGACAAGGA CGAGATCCCC GTGATCGACT TCCGCCAGGA ATGCCGCACC
TTCGCCGAGG GCTGGGTCGA TGTGCAGCGC GAGGAGTTCA AGCGCCTCGG CGTGACCGGC
AACTGGGAAA AGCCGTACCT GACCATGGAC TTCCACGCCG AGCGGGTGAT CGCCGAGGAA
TTCATGAAAT TCCTGATGAC CGGCACGCTC TACCAGGGCT CCAAGCCGGT GATGTGGTCG
CCGGTGGAGA AGACCGCGCT GGCCGAGGCG GAGGTCGAAT ACCATGACCG GCAGACCGAC
GCGATCTGGG TGAAGTTCCC GATCACCAAG GCGCGCGTGG GCGAGAGCCC GGTGGACGAG
CCGGACGACC ATATGGGGGC GGGCGCGCAA TTGCTGGCCG AGCAGTTGGA GGAGTCGGCG
GTCATCATCT GGACCACCAC CCCCTGGACC ATCCCGCAGA ACCGCGCGAT CTGCTTCGGG
GAGGGGATTT CCTATGGTCT GTACGAGATC ACGGCGACGC CGGAGGAGTG CTGGGCGTCC
GTGGGCGATA CCTACATCAT GGCCGACGCG CTGGCCGAGG CCGCGCTGAC CCAGGCGCGG
GTCGAAGGGT TCACCCGGCG GCGCGATGTC ACCGCCGGGG AGTTGAGCCG CGTGACCTGT
GCCCATCCCT TCGCCGGGGC CGAGGGGGCC GGGGGCGAGT GGGATTTCGA CGTGCCGCTT
CTGGCCGGGG ACCATGTGAC CGACGATGCC GGGACCGGCT TCGTGCATAC CGCGCCCAGC
CATGGCGATG ACGACTACGC CATCGGAGTC AAGCACGGGT TGCCGATGAC CTATAACGTG
CTGGATGACA GCAGTTATCG CGCCGATCTG CCGTTCTTCG GCGGCGAATG CATCCTCAAG
CCCAACGGCA AGCCCGGCGG GGCCAACAAG GCGGTGATCG CCAAGCTGGT GGAGCTGGAC
CGGTTGCTGG CGCGCCAGCG GATCACGATC TCGGACGCGC ATTCCTGGCG CTCCAAGGCG
CCGGTGATCC GGCTCAACCG CCCGCAATGG TTCGCGGCCA TCGACAAGCC CGTGGGCGAC
GGCAACGACA CCTATGGCGA GACGATCCGC CAGCGCGCGC TGACCTCGAT TGACCAGCTG
GTGACCTGGA CGCCGCAGAC CGGGCGCAAC CGGCTCTATT CGATGATCGA GGCACGGCCC
GACTGGGTGC TCAGCCGTCA GCGGGCCTGG GGTGTGCCGC TCACCTGCTT TGTGAAGAAG
GGTGCGCAAC CTGCTGATCC CGATTATCTT CTTCGCGATC CGGCGGTGAA TGCACGGATC
GTCGAGGCGT TCGAAAATGA AGGCGCGGAT TCCTGGTATG CCGAGGGCGC CAAGGCACGG
TTCCTGGGCA ACGAGCATGA CCCGGAGGCC TATGAGCAGG TCTTCGACAT CCTGGATGTG
TGGTTCGATT CAGGATCCAC CCATGCCTTC GTGCTGCGCG ACCGCGAAGA CGGGTCCGAG
GACGGTCTGG CCGATCTCTA CCTCGAAGGG ACGGACCAGC ATCGCGGCTG GTTCCATTCC
TCGATGCTGC AGGCCTGCGG GACCATGGGG CGCGCGCCCT ATCGCGGGGT GCTGACCCAC
GGCTTCACCC TGGATGCCAA GGGCAACAAG ATGTCCAAAT CCGTCGGCAA CACCGTCGCG
CCCGAGAAGG TCGTGCAGCA ATACGGCGCG GACATCCTGC GGCTCTGGGT GGCGCAGTCG
GATTACACGG TCGACCTGCG GATCGGGGAC GAGATCCTCA AGAACGTCGC CGACAGCTAC
CGGCGGCTGC GCAACACCAT GCGCTACCTT CTGGGGGCGC TGAGCGCGTT CGAAGAGGCC
GACCGGGTGG CGCCCGAGCA GATGCCGGAG ATGGAGCGGG TGATCCTGCA CATGATGGCC
GACCTCGACG AGCGGGTGCG CGCGGGCTAC GCGGCCTATG ATTTCCAGGG GGTGTTCCAG
TCGGTCTTCC ACTTCGCGAC GGTGACCCTC TCGGCGCAGT ATTTCGACAT TCGCAAGGAT
GCGCTCTATT GTGATAAGCC CGACAGCCTG CGGCGGCGCG CGGCGCTGAC GGTGATGGAT
GCGATCTTCC ACCGGCTCAC CGCCTGGCTC GCGCCGATCC TTGTGTTCAC CTGTGAGGAG
GTCTGGCTGG AGCGGTTCCC CGGGCCCGAC AGCTCGATCC ACCTGCAGGA CTTCCCCGCG
CCGCGCCCGG ACTGGCGCCA CCCGGAGGCC GTGGGCCGCT GGGAGGTGAT CCGGGGCGTG
CGCCGGGTGG TGACTGGCGG GCTGGAGCTG GAACGGCAGG CCAAGACCAT TGGCGCTTCG
CTGGAGGCGG CGCCGACCGT CCATGTGCCG GCCCATGTGG CTGGGATGAT CGATCCGGAG
CTTTTTGCCG ATACCTGCAT CGTCTCGCAG CTGACGGTGT CCACCGATCC GGTGCCCGAG
GGGGCCTTCA CCCTGCCGGA TGTGCCCGGG GTCGGCATGG TCTTTGCCCG CGCCGAGGGG
GAGAAATGCC AGCGCTGCTG GAAGATCCTG CCCGATGTGG GCACCCATGC CCATCCGGGC
ACCTGCGCGC GTTGCAACGA CGCGTTGGAC GCCTAG
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| Protein sequence | MCADTPTANQ YKDTLNLPKT DFPMRAGLPK REPEWLARWE EMGIYDRLRE KAKAETRPAF
TLHDGPPYAN GNLHIGHALN KILKDMVVRS QQMMGRDARY IPGWDCHGLP IEWKIEEKYR
AKGRDKDEIP VIDFRQECRT FAEGWVDVQR EEFKRLGVTG NWEKPYLTMD FHAERVIAEE
FMKFLMTGTL YQGSKPVMWS PVEKTALAEA EVEYHDRQTD AIWVKFPITK ARVGESPVDE
PDDHMGAGAQ LLAEQLEESA VIIWTTTPWT IPQNRAICFG EGISYGLYEI TATPEECWAS
VGDTYIMADA LAEAALTQAR VEGFTRRRDV TAGELSRVTC AHPFAGAEGA GGEWDFDVPL
LAGDHVTDDA GTGFVHTAPS HGDDDYAIGV KHGLPMTYNV LDDSSYRADL PFFGGECILK
PNGKPGGANK AVIAKLVELD RLLARQRITI SDAHSWRSKA PVIRLNRPQW FAAIDKPVGD
GNDTYGETIR QRALTSIDQL VTWTPQTGRN RLYSMIEARP DWVLSRQRAW GVPLTCFVKK
GAQPADPDYL LRDPAVNARI VEAFENEGAD SWYAEGAKAR FLGNEHDPEA YEQVFDILDV
WFDSGSTHAF VLRDREDGSE DGLADLYLEG TDQHRGWFHS SMLQACGTMG RAPYRGVLTH
GFTLDAKGNK MSKSVGNTVA PEKVVQQYGA DILRLWVAQS DYTVDLRIGD EILKNVADSY
RRLRNTMRYL LGALSAFEEA DRVAPEQMPE MERVILHMMA DLDERVRAGY AAYDFQGVFQ
SVFHFATVTL SAQYFDIRKD ALYCDKPDSL RRRAALTVMD AIFHRLTAWL APILVFTCEE
VWLERFPGPD SSIHLQDFPA PRPDWRHPEA VGRWEVIRGV RRVVTGGLEL ERQAKTIGAS
LEAAPTVHVP AHVAGMIDPE LFADTCIVSQ LTVSTDPVPE GAFTLPDVPG VGMVFARAEG
EKCQRCWKIL PDVGTHAHPG TCARCNDALD A
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