Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1920 |
Symbol | |
ID | 5712914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2005076 |
End bp | 2005981 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641267846 |
Product | hypothetical protein |
Protein accession | YP_001533263 |
Protein GI | 159044469 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000181581 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000000000329346 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCTGC CGCCACGTCC GCCGCGCATC GCCACGCTGG CGCCCGGCCT GCGGCGGGTG ATCGCCGAGA ACCCGTCGCC CATGACCTAC TGGGGCACGA ACAGCTTCGT GCTGGGCACC GGGCGCGTGG CCGTGATCGA CCCGGGGCCT GCCGGGGGCG ACCAGGTCGA CACGATCCTC GGGCTGCTCG ATCCCGGAGA GGTCGTCAGC CATGTGTTTG TCACCCATGC CCATCTTGAT CACAGCCCCG GCGCCCGGGA ACTCGCCGCG CGCAGCGGGG CCCCGGTGCT GGCCTTTGGC GATGCGTCGG CGGGGCGCAG CCCGGTCATG GCGGCGCTGG CAGAAGGCGG CGCATTGGAG GGCGGCGAAG GGGTGGACCA CGCCTTCGAG CCCGACATCC GCATGGCCCA TGGCGACCGG GTGGGCGGCG GCGACTGGAC CCTGGAGGCG CTGTGGACGC CGGGACATTT CGGCAACCAC CTGAGTTTCG CCTGTCCCGA ACAGGACGCG CTGTTCTGCG GCGATCTCGT GATGGGCTGG TCGACATCCC TGGTCTCGCC GCCCGATGGC GATCTGTCGG CCTTCATGGC GTCGCTGGAC TTGCTTGCGC GGCGGAGGGA GGCGACCTTC CACGCCGGGC ACGGTGCGCC GATTGTCGAC CCGCGGGCTC GCATCGCCGA GCTGGTCGCC CACAGGCAGA TGCGCAGCGC CCAGATCCGT GCCGCCCTGG GCGAGGCGCC AGGCACCGCC GCGGCGCTGG CGGCGCGGAT CTACACCGAG ACCCCGCGTC CCCTCCTGCC CGCCGCCGCG CGCAACGTCC TTGCGCATCT CATTGATATG GCATCAAGAA ATGAGGCCGA TCACGAAGGC CCGTTGACAT CGCAGACCGT GTTCCGTGCA GTATAG
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Protein sequence | MNLPPRPPRI ATLAPGLRRV IAENPSPMTY WGTNSFVLGT GRVAVIDPGP AGGDQVDTIL GLLDPGEVVS HVFVTHAHLD HSPGARELAA RSGAPVLAFG DASAGRSPVM AALAEGGALE GGEGVDHAFE PDIRMAHGDR VGGGDWTLEA LWTPGHFGNH LSFACPEQDA LFCGDLVMGW STSLVSPPDG DLSAFMASLD LLARRREATF HAGHGAPIVD PRARIAELVA HRQMRSAQIR AALGEAPGTA AALAARIYTE TPRPLLPAAA RNVLAHLIDM ASRNEADHEG PLTSQTVFRA V
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