Gene Dshi_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1884 
Symbol 
ID5712876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1961615 
End bp1962088 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID641267808 
Productputative DnaK suppressor protein 
Protein accessionYP_001533227 
Protein GI159044433 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0456991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.261909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG ACACCAATAC TGATCATTCG GCCCTGCATG AGGGAGCAGA CATGCGTGTA 
GAGACGTTCT TGCCTGATGA TTACCGTCCC GCAGAGGACG AACCGTTCAT GAACGAGCGC
CAGACGGAGT ATTTCCGTCG CAAGCTGCTG GCCTGGAAGG CCGAGTTGCT GGAAGAGAGC
CAGAACACCA TTTCGGAGCT TCAGGGTGCG GCGCGCAACA TTCCCGACGT GGCCGATCGC
GCCAGCGAGG AAACCGACCG GGCGCTGGAG CTGCGCACCC GGGACCGGCA GCGCAAGCTG
ATCTCGAAGA TCGACGCGGC CCTGCGCCGG ATCGAAGAGG GCGAGTACGG ATATTGCGAA
GCCACGGGCG AGCCGATCTC GCTGAAGCGG CTGGATGCGC GCCCGATCGC GACCCTGAGC
CTGGAGGCAC AGGAGCGGCA CGAGCGCCGC GAGAAGGTGC ATCGCGACGA CTGA
 
Protein sequence
MAADTNTDHS ALHEGADMRV ETFLPDDYRP AEDEPFMNER QTEYFRRKLL AWKAELLEES 
QNTISELQGA ARNIPDVADR ASEETDRALE LRTRDRQRKL ISKIDAALRR IEEGEYGYCE
ATGEPISLKR LDARPIATLS LEAQERHERR EKVHRDD