Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1879 |
Symbol | |
ID | 5712871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1957234 |
End bp | 1958421 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267803 |
Product | hypothetical protein |
Protein accession | YP_001533222 |
Protein GI | 159044428 |
COG category | [S] Function unknown |
COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.453094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.342483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCTGC CGTTCTTCGC CGAGCTTCGG AAGGGCGGCG TCCCGGTGTC GGTGCGCGAA TACCTGACCT TCCTCGAAGG GTTGGGGCGC GGCATGGCCA CCTATGACCC GGAACAGTTC TACTTCCTCG CCCGCTGCGC GATGGTCAAG GACGAGCGCC ATCTCGACCG GTTCGACCGC GCCTTCGCCA CCGCTTTCAA CGGGTTGGAG GCGATCACGC CTGAGCAGGT GCTCGACGCC GTGGACCTGC CCCGCGAATG GCTCGAAAAG CTGGCCGAGA AGCATCTGAG CCCAGAAGAA CGCGCCGAGA TCGAAGCCCT GGGCGGGTTT GACAAGCTGA TGGAGACCCT GAAAGAGCGG CTCAAGGACC AGCAGGGCCG CCACCAGGGC GGCTCGAAGT GGATCGGCAC CGCCGGAACC TCCCCCTTCG GCGCCTACGG CTACAACCCC GAAGGCGTGC GCATCGGGCA GAATGAGTCC CGCCACAAAC GCGCGGTCAA GGTCTGGGAC AAGCGCGAAT TTCGCAACCT CGACGACAGT GTCGAGCTGG GCACCCGCAA CATCAAGGTG GCGCTCAAAC GCCTGCGCCA ATGGGCCCGC GACGGGGCCG CCGAAGAGCT CGACCTCGAC GGCACGATCC GCGCCACCGC CGAGCACGGC TATCTCGACG TGAAAACCCG GCCCGAGCGG CGCAATGCGG TCAAGGTGCT GCTGTTTCTC GATGTGGGCG GGTCCATGGA CCCCTATATC CGGCTGGTCG AAGAGCTGTT CTCGGCCGCG CGCGCCGAGT TCAAGCACCT GGAATATTTC TACTTCCACA ACTGCATCTA CGAGGGGCTC TGGCGCGACA ACCGCCGCCG CTGGTCCGAA CAGACCCCGA CCTGGGACGT GCTCCATACC TACGGGTCGG ATTACAAGTG CATCATCGTC GGTGACGCCT CCATGTCGCC CTACGAGATC GCCCATCCCG GCGGCGCCAA CGAGCATTGG AACCCCGAGG CGGGCCATGT CTGGCTCGCC CGGGTGCGCG ACCAGTGGCC CAACCACCTG TGGCTCAACC CGGTGCCGGA ACGTCACTGG CGCTACACCC ATTCCATCGA GATGATCCAG CAGGTCTTCG GCGCCGAGCG CATGGTGCCC ATGACCCTCG AAGGCATCGA CCGCGGCATG CGGGTGCTGG GGCGGTAA
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Protein sequence | MFLPFFAELR KGGVPVSVRE YLTFLEGLGR GMATYDPEQF YFLARCAMVK DERHLDRFDR AFATAFNGLE AITPEQVLDA VDLPREWLEK LAEKHLSPEE RAEIEALGGF DKLMETLKER LKDQQGRHQG GSKWIGTAGT SPFGAYGYNP EGVRIGQNES RHKRAVKVWD KREFRNLDDS VELGTRNIKV ALKRLRQWAR DGAAEELDLD GTIRATAEHG YLDVKTRPER RNAVKVLLFL DVGGSMDPYI RLVEELFSAA RAEFKHLEYF YFHNCIYEGL WRDNRRRWSE QTPTWDVLHT YGSDYKCIIV GDASMSPYEI AHPGGANEHW NPEAGHVWLA RVRDQWPNHL WLNPVPERHW RYTHSIEMIQ QVFGAERMVP MTLEGIDRGM RVLGR
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