| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1860 |
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| Symbol | yajC |
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| ID | 5712852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1939449 |
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| End bp | 1939766 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267784 |
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| Product | preprotein translocase subunit |
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| Protein accession | YP_001533203 |
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| Protein GI | 159044409 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1862] Preprotein translocase subunit YajC |
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| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.529455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.676503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGCAA CACCTGCCTA CGCCCAGGCC GCCGGGGCCG GAGGGGCCTT TACCTCCTTC
ATCCCGCTGA TCCTGATCTT CGCCATCATG TATTTCCTGC TGATCCGTCC GCAGCAGAAA
AAAGTGAAGG AACACAAGAA GATGGTCGAG GCGTTGCGGC GCGGAGACCA GATCGTCACC
CAGGGCGGCC TGATCGGCAA GGTCACCAAG GTCGTCGATG ACAACGAGGT CAAGGTCGAG
ATCGCGACCG GCACCGAGGT GCGCGTGGTG CGCCACACGA TCCAGCAGGT CCTGACCAAG
ACCGAACCGG CGAGCTGA
|
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| Protein sequence | MFATPAYAQA AGAGGAFTSF IPLILIFAIM YFLLIRPQQK KVKEHKKMVE ALRRGDQIVT
QGGLIGKVTK VVDDNEVKVE IATGTEVRVV RHTIQQVLTK TEPAS
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