Gene Dshi_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1846 
Symbol 
ID5712838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1927300 
End bp1927743 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID641267770 
Producthypothetical protein 
Protein accessionYP_001533189 
Protein GI159044395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.325818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCC TGAAATCCGT CGCCCTCGCC GCCCTGATCG GCCTCACCTC GACCGTCTCG 
GCCCTGGCCG AAGGCCCCTC GAAAGTGGTG ACCGTAGTGA CCTCGCCCGA GCCGCAAACC
CAGCTGATGG CCATGGTGCT GACCATGCAG GCTGCACAGC AGGGTGCCGA GGCCCATATC
CTGCTCTGCG GCCCGGCGGG CGATCTTGGC CTGCGCGACG CGCCGGCCGG TGCCACCGCC
GGCCAGCCGC CCAAGGACAT GAGCCCCCAG GGGCTGATGA AGGCGATTCA GGCCAATACG
GGCGCCACGG TGGAGGTCTG CGCGATCTAT CTGCCCGGGC GCGGTGAAGA TGCTTCGGTG
CTCCTGGAGG GTGTTGGTGT GGCCAAGCCC GAAGAGATGG CCGCGAAGTT GATGGCGCCC
GAGGCGCGTG TTCTCAGCTT CTGA
 
Protein sequence
MPFLKSVALA ALIGLTSTVS ALAEGPSKVV TVVTSPEPQT QLMAMVLTMQ AAQQGAEAHI 
LLCGPAGDLG LRDAPAGATA GQPPKDMSPQ GLMKAIQANT GATVEVCAIY LPGRGEDASV
LLEGVGVAKP EEMAAKLMAP EARVLSF