Gene Dshi_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1836 
Symbol 
ID5712828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1916867 
End bp1917976 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content68% 
IMG OID641267760 
Producthypothetical protein 
Protein accessionYP_001533179 
Protein GI159044385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.934972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT ACCAGATCTG GGCGCTGGCC GCCGATCAGG TCCTCGTGCA AGAGGGGGTG 
ACCGGCAGCG ATGGTGTGCC TGTCCCCGGG ACCGCGGTGC CCGACGGGTT GTCGGGCGGT
AACCAAGGCG CGGGACGCCA TCTGCCGGAC CGATTCATCA CGCTGCAGAG CAACGGCTGG
GTGCCGATCT CGATCCGCGA TAACGAGGGG GATGTGAACT TCGCCGACAA TGACGGCACG
CAGGCCCTTG CCGCGACCAC CCAGTTCGGC GGTACGCAGT ACGCCCCCGG GCGGCGGGTG
GAGGCCGAGT ATACCCTGCA GGTCACTGAC GGTACCGACA CCTACACCAT CATCGGCTTC
AACATTCGCG AGCCGGATTC CGAGTTCAAC AACTCCTTCG GCAGCACCGA AGGGCTGGCC
TTCATCGGGA CTTTTCCACC CGTGGGCGTG CCGCTGCGGG TGATCAGCGC CTCCGAAGGT
CCGGGCAGGA CCGCGACACC GGCTGCCACC TACGCCACCC CGCCTTGCTT CACCCCGGGG
ACCCTGATCG AGGTGCCCGG TGGCACCTGC CCGGTGGAGG CATTGCAGGT GGGCGATCTG
GTGCTGACCC GCGATGATGG GGCGCAGCCG GTGCGCTGGG TCGGGTCCGC GCGGATCGAC
AGCGCGAAGC TTGCCGGCAA CCCACGCTTC CGGCCCATCC TGCTGCGCGC GGGCGCGCTG
GGGCCGGGGC GGCCGGCGCG GGACATGCGC GTGTCGCGGC AGCACCGGGT GTTGTTGGAG
GATTGGCGCG CGGACCTGCT GTTTGGCAGC GCGCAGGTGC TGGCGGCGGC GGCGCATCTG
GTGAACGACG ACACCATCGT GCAGGTCTAC GACCTGGAGC CGGTCACCTA TCATCATTTC
ATGTTCGATC GGCACCAGAT CGTGCGCGCG GACGGGATCT GGGCCGAGAG CCTGCGCCCC
GGCCCCGCGA TCCTGTCGAC CCTGGGCCGC GCCGCCCAAG AGGAGCTGTT CGAGATCTTC
CCGGAACTGC GCGAGGCCGA GGATGCCCCC TTCCCCGCTG CAAGGCCGCT CCTGCGGGAT
TGGGAAACCG AGGTGCTGCT CAAACCCTGA
 
Protein sequence
METYQIWALA ADQVLVQEGV TGSDGVPVPG TAVPDGLSGG NQGAGRHLPD RFITLQSNGW 
VPISIRDNEG DVNFADNDGT QALAATTQFG GTQYAPGRRV EAEYTLQVTD GTDTYTIIGF
NIREPDSEFN NSFGSTEGLA FIGTFPPVGV PLRVISASEG PGRTATPAAT YATPPCFTPG
TLIEVPGGTC PVEALQVGDL VLTRDDGAQP VRWVGSARID SAKLAGNPRF RPILLRAGAL
GPGRPARDMR VSRQHRVLLE DWRADLLFGS AQVLAAAAHL VNDDTIVQVY DLEPVTYHHF
MFDRHQIVRA DGIWAESLRP GPAILSTLGR AAQEELFEIF PELREAEDAP FPAARPLLRD
WETEVLLKP