Gene Dshi_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1826 
Symbol 
ID5712817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1905847 
End bp1906206 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID641267749 
Producthypothetical protein 
Protein accessionYP_001533169 
Protein GI159044375 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.756996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.856699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTG TCGATTTCAA GGACGCCGGC GCCCCCGGCA AACGCCGCCT CGCGGACCTG 
CCCGACCGCG TGGTCGAGGG CGATCCGCAC CACGAAACCC AGGTCCGCTT CACCAGTCCC
GATGGCGCGC TTCTGGCCGG AACCTGGACC AGCACGCCGG GCAAATGGGT CGCCTTCACC
GACCGCGACG AATTCTGCGT GCTGCTGACG GGCCATATCA AGCTGGTGGG CGAGGACGGA
ACCGAACAGG AATTCCGCGC CGGTGACAGC TTCCTGATCC CGAACGGGTT TCGCGGGTTC
TGGCACGTGC TGGAGCCGAC GACCAAGCAT TTCGTCATCC GGGTCCACGA ACCCGCCTGA
 
Protein sequence
MRVVDFKDAG APGKRRLADL PDRVVEGDPH HETQVRFTSP DGALLAGTWT STPGKWVAFT 
DRDEFCVLLT GHIKLVGEDG TEQEFRAGDS FLIPNGFRGF WHVLEPTTKH FVIRVHEPA