| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1811 |
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| Symbol | lpdV |
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| ID | 5712799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1887561 |
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| End bp | 1888958 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267731 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001533154 |
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| Protein GI | 159044360 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.352769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGA CATCCTTTGA CATGGTGGTG GTCGGAGCCG GGCCGGGCGG CTACGTCGCG
GCGATCCGGG CGGCCCAGCT CGGGCTCAAG GTCGCGATCG TCGAGCGCGA GCATATGGGC
GGCATCTGCC TCAACTGGGG CTGCATTCCG ACCAAGGCGA TGCTGCGCAG CTCCGAGGTG
TTTCACCTGA TGCACCGCGC CAAGGAGTTC GGGCTGAAGG CGGACGGGGT CGGCTACGAC
CTCGACGCCG TGGTCGCGCG CAGCCGGGCG ATTGCCAAGC AGCTCAATTC CGGTGTCTCG
CACCTGATGA AGAAGAACAA GGTCACCGTG GTCATGGGCG AGGCCAGTCT GCCCGCCAAG
GGCACGGTTG CCGTCAAGAC CGACAAGGGC ACCGAGACCC TGCGCGCGCC CCATGTCGTG
CTGGCCACCG GCGCGCGGGC CCGCGAGCTG CCGGGGCTGG AGGCCGATGG CGATCTGGTC
TGGACCTACA AGCACGCGCT GACGCCCAAG CGGATGCCGA AGAAGCTGCT GGTGATCGGA
TCGGGGGCCA TCGGGATCGA ATTCGCCAGC TTCTACAATA CCTTGGGGAC CGAGACGACC
GTGGTCGAGG TGATGGACCG GATTCTGCCG GTCGAAGATG CCGAGATCAG CGGCTTTGCC
AAGAAGCAGT TCGAGAAGCA GGGCATGACC ATCCGCGAGA AGGCCATGGT CAAGAGCCTC
GAGCGCGGCA AGGGCACGGT GACCGCGCAG ATCGAGCAGG GCGGCAAGAC CACCGCCGAG
ACATTCGACA CCGTGATTTC CGCCGTGGGG ATCGTCGGCA ATACCGAAAA GCTGGGGCTG
GAGGCGCTCG GCGTCCGGGT CGAGAAAACC CATGTGGTCA CGGACGCCTA TTGCCGGACG
GGCGTCGAGG GGCTCTATGC CATCGGCGAT CTGGCCGGTG CGCCCTGGCT GGCGCACAAG
GCCAGCCACG AGGGCGTGAT GGTGGCCGAA CTGATCGCCG GCAGGAACGA CGTGCATCCG
GTCACCCCGG ACAGCATTGC GGGCTGCACC TATTGCCAGC CCCAGATCGC CAGCGTCGGC
ATGACCGAGG CCCAGGCGAA AGAGGCCGGG CACAAGATCA AGGTCGGCCG CTTTCCGTTC
ATCGGCAACG GCAAGGCCAT CGCCCTGGGC GAGCCGGAGG GCATGATCAA GACCGTGTTC
GACGCGGGCA CGGGCGAGTT GCTGGGCGCG CATATGGTGG GCGCCGAAGT CACCGAGCTG
ATCCAGGGCT ATGTGGTGGG TCGGCAGTTG GAGACCACCG AGGAGGACCT GATGAACACG
GTCTTCCCGC ACCCCACGCT CAGCGAGATG ATGCACGAGT CGGTGCTCGA CGCCTACGGC
CGCGCCCTGC ATTTCTGA
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| Protein sequence | MAETSFDMVV VGAGPGGYVA AIRAAQLGLK VAIVEREHMG GICLNWGCIP TKAMLRSSEV
FHLMHRAKEF GLKADGVGYD LDAVVARSRA IAKQLNSGVS HLMKKNKVTV VMGEASLPAK
GTVAVKTDKG TETLRAPHVV LATGARAREL PGLEADGDLV WTYKHALTPK RMPKKLLVIG
SGAIGIEFAS FYNTLGTETT VVEVMDRILP VEDAEISGFA KKQFEKQGMT IREKAMVKSL
ERGKGTVTAQ IEQGGKTTAE TFDTVISAVG IVGNTEKLGL EALGVRVEKT HVVTDAYCRT
GVEGLYAIGD LAGAPWLAHK ASHEGVMVAE LIAGRNDVHP VTPDSIAGCT YCQPQIASVG
MTEAQAKEAG HKIKVGRFPF IGNGKAIALG EPEGMIKTVF DAGTGELLGA HMVGAEVTEL
IQGYVVGRQL ETTEEDLMNT VFPHPTLSEM MHESVLDAYG RALHF
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