| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1809 |
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| Symbol | uvrA |
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| ID | 5712797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1883361 |
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| End bp | 1886222 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267729 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_001533152 |
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| Protein GI | 159044358 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAGT TGAAGAAGAT CGAGGTGCGC GGCGCGCGCG AGCACAACCT CAAATCCATC
GACGTGGACA TTCCCCGCGA CCGGCTGGTC GTGATCACCG GGCTGTCGGG CTCGGGCAAG
TCGTCGCTTG CCTTCGACAC GATCTATGCC GAGGGCCAGC GCCGCTATGT CGAGAGCCTC
AGCGCCTATG CGCGCCAGTT CCTCGACATG ATGCAGAAGC CCGATGTGGA TCACATCTCG
GGCCTGAGCC CGGCGATCTC GATCGAGCAG AAGACGACCT CGAAGAACCC GCGCTCCACC
GTCGGTACGG TGACGGAAAT CTACGACTAC ATGCGGCTGC TCTTCGCGCG GGTCGGCACA
CCCTACAGCC CCGCCACCGG TCTGCCCATC GAAGCACAGC AGGTGCAGGA CATGGTGGAC
CGGGTGATGG CGATGGAGGA GGGGACGCGC GCCTACCTGC TGGCCCCGAT CATCCGCGAC
CGCAAGGGCG AATACCGCAA GGAATTCCTG GAGCTGCGCA AGCAGGGGTT CCAGCGGGTG
AAGGTCGACG GCGCATTCCA CGACCTCGAC AGCCCGCCCA CGCTGGACAA GAAATTCCGC
CACGATATCG ACGTGGTGGT GGACCGGATC GTTGTGAAGG AGGGGATCGA GACCCGGCTG
GCCGACAGCT TCCGCACCGC ACTCGACCTT GCCGACGGGA TCGCGATCCT GGAGACCGCC
CCGACGGAGG GGGAGCCGGA GCGGCACACG TTCTCGGAAA AATTCGCCTG TCCGGTGTCG
GGCTTCACCA TTCCGGAAAT CGAGCCGCGG TTGTTTTCGT TCAACGCGCC CTTCGGGGCC
TGCCCGGCCT GCGACGGGTT GGGCGTCGAG CTGTTCTTCG ACGAGCGCCT CGTGGTGCCG
GATGCCACGC TGACGCTGGC CAACGGGGCG CTGGCGCCCT GGCGCAAGGG CAAGTCGCCC
TATTTCCTGC AGACCATCAA CGCCATCGCC AAGCATTACG AATTCGACCC CAAGACCCCG
TGGAAGGCCC TGCCCGAAAA GGTGCAGGAG GTGTTCCTGC GCGGCTCCGG CGAGGAAGAG
ATCACCTTCC GCTATGACGA GGGCGGCCGG GTCTATCAGG TCAGCCGTGC CTTCGAGGGG
GTGATCCCCA ACATGGAGCG GCGCTACCGC GAAACCGACA GCAGTTGGAT CCGGGAGGAG
TTCGAGCGCT ATCAGAACAA CCGCTCCTGC GGGACCTGCG GCGGCTATCG CCTGCGGCCC
GAGGCGCTGG CGGTGAAGAT TGCCGGGCTC CATGTGGGCG AGGTGGTGCA GATGTCGATC
CGGGAGGCGC ATGACTGGTG CCGGACCGTG CCGGAGCACC TGAGCGTGCA GAAGAACGAG
ATCGCCCGCG CTATCCTCAA GGAGATCCGC GAACGGCTCG GCTTTCTCAA CAATGTGGGT
CTCGAATACC TCACGCTCAG CCGCAATGCC GGGACCCTGT CGGGAGGCGA GAGCCAGCGC
ATCCGGCTGG CGAGCCAGAT CGGATCGGGG CTGACCGGGG TGCTCTATGT GCTCGACGAG
CCGTCCATCG GGCTGCACCA GCGCGATAAT GACCGGCTGC TGACGACTCT GAAGAACCTG
CGCGACCAGG GCAATACGGT GATCGTGGTC GAGCATGACG AGGAGGCCGT GCGGGAGGCC
GATTACGTTT TCGACATCGG CCCCGGCGCG GGGGTGCATG GCGGCCAGGT GGTGGCCCAT
GGCACGCCGG CCCAGATCAT GGCCAACCCG GCCTCGATCA CCGGCGATTA CCTCGCCGGG
CGGCGCGAGA TCCCGGTGCC CGCCACCCGC CGCAAGGGTA ACAAGAAAAA GGTCACGGTG
CGCAAGGCCA CGGGCAACAA CCTGCAGGAC CTGACGGTGG ATTTCCCCCT GGGCAAGTTC
GTCTGCGTGA CCGGCGTGTC GGGGGGCGGC AAGTCCACCC TGACCATCGA GACCCTGTTC
AAGACCGCGT CCATGCGGCT GAACGGGGCG CGCCAGACGC CGGCACCCTG CGAGACGATC
AAGGGGTTGG AGCATCTCGA CAAGGTCATC GATATCGACC AGCGGCCCAT CGGGCGCACG
CCGCGGTCGA ACCCGGCGAC CTACACGGGC GCGTTCACGC CGATCCGCGA CTGGTTCGCC
GGGCTGCCCG AGGCCAGGAC GCGCGGCTAC AAGCCGGGGC GGTTTTCCTT CAACGTGAAG
GGCGGGCGCT GCGAGGCGTG CCAAGGCGAC GGGGTGATCA AGATCGAGAT GCACTTTTTG
CCGGATGTCT ATGTCGAATG CGAGACCTGC AAGGGCAAGC GGTACAACCG CGAGACCCTG
GAGGTGACAT TCAAGGGCAA GTCCATCGCC GATGTGCTGG ACATGACGGT CGAGGATGCG
CAGGAGTTCT TCAAGGCGGT GCCGTCGATC CGCGAGAAGA TGGATGCGCT GATGCGCGTC
GGGCTCGGCT ATATCAAGGT GGGCCAGCAG GCGACGACCC TCTCGGGCGG CGAGGCGCAG
CGCGTCAAGC TCAGCAAGGA GTTGGCCAAG CGGTCCACGG GCCGGACGCT CTATATCCTG
GACGAGCCGA CCACGGGGCT GCATTTCGAG GATGTCCGCA AGCTGCTGGA GGTGCTGCAC
GAGTTGGTGG AGCAGGGCAA CACCGTGGTG GTGATCGAGC ACAACCTCGA TGTGATCAAG
ACCGCCGACT GGCTGATCGA TATCGGCCCC GAAGGCGGGG ACGGGGGCGG CACGCTGGTG
GCCACGGGCA CGCCGGAGCA GGTGGCCGAG GTCGCCGAGA GCCACACGGG CCGCTACCTC
AAGCCCATGC TCGCGGGCGC CAAGCGGGTC GCGGCGGAAT AG
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| Protein sequence | MPELKKIEVR GAREHNLKSI DVDIPRDRLV VITGLSGSGK SSLAFDTIYA EGQRRYVESL
SAYARQFLDM MQKPDVDHIS GLSPAISIEQ KTTSKNPRST VGTVTEIYDY MRLLFARVGT
PYSPATGLPI EAQQVQDMVD RVMAMEEGTR AYLLAPIIRD RKGEYRKEFL ELRKQGFQRV
KVDGAFHDLD SPPTLDKKFR HDIDVVVDRI VVKEGIETRL ADSFRTALDL ADGIAILETA
PTEGEPERHT FSEKFACPVS GFTIPEIEPR LFSFNAPFGA CPACDGLGVE LFFDERLVVP
DATLTLANGA LAPWRKGKSP YFLQTINAIA KHYEFDPKTP WKALPEKVQE VFLRGSGEEE
ITFRYDEGGR VYQVSRAFEG VIPNMERRYR ETDSSWIREE FERYQNNRSC GTCGGYRLRP
EALAVKIAGL HVGEVVQMSI REAHDWCRTV PEHLSVQKNE IARAILKEIR ERLGFLNNVG
LEYLTLSRNA GTLSGGESQR IRLASQIGSG LTGVLYVLDE PSIGLHQRDN DRLLTTLKNL
RDQGNTVIVV EHDEEAVREA DYVFDIGPGA GVHGGQVVAH GTPAQIMANP ASITGDYLAG
RREIPVPATR RKGNKKKVTV RKATGNNLQD LTVDFPLGKF VCVTGVSGGG KSTLTIETLF
KTASMRLNGA RQTPAPCETI KGLEHLDKVI DIDQRPIGRT PRSNPATYTG AFTPIRDWFA
GLPEARTRGY KPGRFSFNVK GGRCEACQGD GVIKIEMHFL PDVYVECETC KGKRYNRETL
EVTFKGKSIA DVLDMTVEDA QEFFKAVPSI REKMDALMRV GLGYIKVGQQ ATTLSGGEAQ
RVKLSKELAK RSTGRTLYIL DEPTTGLHFE DVRKLLEVLH ELVEQGNTVV VIEHNLDVIK
TADWLIDIGP EGGDGGGTLV ATGTPEQVAE VAESHTGRYL KPMLAGAKRV AAE
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