Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1773 |
Symbol | |
ID | 5713340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1839968 |
End bp | 1840660 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267691 |
Product | putative metalloprotease |
Protein accession | YP_001533116 |
Protein GI | 159044322 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.480116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAC TCACACCTCT TCTCTTGGCG CTGGCCTGGG GGCTCGGGCT CTACTGGATC GGCGCGAAAC GCACCGCGCG GGAGTTGGAC AAGCGCTCCA CCGAGTTGCG CGACCGCGAG TTGGGCCGGT TGACCGACCG GATGGCCAAG GCGCTGGATC TCGAGCAGAT CAAGGTCAAC ATCTACGAAG TGGATCCGGT GAACGGGCTG GCGGCACCCG ATGGGCGGAT CTTCATCACC CGGGGGTTTT TCCGCAAGTA CCAGACCGGG GAGGTGACGG CGGCCGAGAT GGCCTCGGTC ATCGCCCACG AGCTGGGCCA TGTGGCACTG GGGCATTCCA GGCGGCGGAT GATCGATTTT TCCGGCCAGA ACGCGATCCG CGTGGCGCTG GCCACGGTGC TGGGGCGGTT CATCCCGTTC GTCGGCGTGG CGATCGCGAA CATGCTGGTG AGCCTTCTGG CGGCGCGGCT GTCGCGGGGC GACGAGTACG AGGCGGATGC CTATGCCTCG GCCCTGCTGG TGAAGGCCGG GATCGGGACG GAGCCGCAGA AGACCCTGTT TCGCAAGCTC GAGGGGTTGA CCACCGGGGC CGGGCGGGCG CAGGCGCCGG CCTGGCTGAT GAGCCATCCC AAGACCGAGG AGCGGATCAA GGCGATCGAG GCGCTGGAGA AGCGCTGGGT CGTGCCGGGC TGA
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Protein sequence | MLKLTPLLLA LAWGLGLYWI GAKRTARELD KRSTELRDRE LGRLTDRMAK ALDLEQIKVN IYEVDPVNGL AAPDGRIFIT RGFFRKYQTG EVTAAEMASV IAHELGHVAL GHSRRRMIDF SGQNAIRVAL ATVLGRFIPF VGVAIANMLV SLLAARLSRG DEYEADAYAS ALLVKAGIGT EPQKTLFRKL EGLTTGAGRA QAPAWLMSHP KTEERIKAIE ALEKRWVVPG
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