| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1772 |
|---|
| Symbol | |
|---|
| ID | 5713339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 1839233 |
|---|
| End bp | 1839772 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641267690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001533115 |
|---|
| Protein GI | 159044321 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC GGGTGCTGCT CGATGCCTGC GTGCTCTACC CGACCCTGCT GCGCGCGTTG
CTGCTGAGCT GCGCCCGCGC AAGTCTCTTC ACGCCCCTCT GGTCCCCGCG CATCCTCGCA
GAGTGGTCCC ACGCCGCCGC GCGCTCCGGC CCCGACGAGG CCGCCCTGGT GGCGGGCGAG
ATCGCCATCC TGCGCACCGC TTTCCCGGAC GCCGAGATCA CGCCCCCAAA CACCCTCACC
GACACCCTCA GCCTGCCCGA CGCCGATGAT CGCCACGTCC TCGCCGCCGC CCTGCACGGG
AAGGCCGACG CGCTGCTGAC CGCCAACCTC AAGGATTTTC CGACCCGCAC GCTGACCCGT
CACGGGTTGT TGCGGTACGA GCCCGACAGC TTCCTGTGCC ACCTGCGCGC CGCACCGGGC
ACCGATGCGC TGCTCTTGCC ACAGGTCCAG CGCGCCGCCG ATGTCCTTGG CGTAACACCG
CGCAGCGTGC TCAAACGCGC CCGCCTGCCC CGGCTCGGCA AGGCGCTCTT TCCCGGCTGA
|
|---|
| Protein sequence | MTERVLLDAC VLYPTLLRAL LLSCARASLF TPLWSPRILA EWSHAAARSG PDEAALVAGE
IAILRTAFPD AEITPPNTLT DTLSLPDADD RHVLAAALHG KADALLTANL KDFPTRTLTR
HGLLRYEPDS FLCHLRAAPG TDALLLPQVQ RAADVLGVTP RSVLKRARLP RLGKALFPG
|
|---|
| |