| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1767 |
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| Symbol | |
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| ID | 5713334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1834326 |
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| End bp | 1834865 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267685 |
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| Product | putative lysine carboxylase |
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| Protein accession | YP_001533110 |
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| Protein GI | 159044316 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.557273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCA TCTGTGTCTT CTGCGGCGCC CGCGCCGGTC TCACCCCCAG CCATACCGAT
ACCGCCGAAG CCCTCGGGCG CTGGCTGGCC GAGGCGGGGC ACCGGTTGGT CTACGGCGCC
GGAGATGTGG GCCTGATGGG CAGTGTCGCC CGCGCGGCCC AGCAGGCAGG CGGCGACACG
TTCGGGGTGA TCCCGGCCCA CCTGCTCGAC CTGGAGGTCG GCAAGACGGA CCTGACACGT
TTCGTGGTGA CCGAAACCAT GCACGAGCGC AAGAAGGTGA TGTTCGCCAA TTCCGACGCC
ATCGTGGTGC TGCCTGGCGG CGCGGGGTCG CTGGACGAGT TCTTCGAGGT GCTGACCTGG
CGCCAGCTTG GCCTGCACGC CAAGCCGATC CTGCTGCTGA ACGTGGACGG CTACTGGACG
CCGCTTCTGG CCCTTATCGA CCACGTGATC GCCCAAGGCT TCGCCGCCGA GAGCCTGCGC
GGCTTCATCA CGGTCTGCGC GGATCTGCAG GCGGTGCAAG CCGCTCTCGG TCCGGCCTGA
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| Protein sequence | MSSICVFCGA RAGLTPSHTD TAEALGRWLA EAGHRLVYGA GDVGLMGSVA RAAQQAGGDT
FGVIPAHLLD LEVGKTDLTR FVVTETMHER KKVMFANSDA IVVLPGGAGS LDEFFEVLTW
RQLGLHAKPI LLLNVDGYWT PLLALIDHVI AQGFAAESLR GFITVCADLQ AVQAALGPA
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