| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1721 |
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| Symbol | ihfA |
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| ID | 5713287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1788324 |
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| End bp | 1788629 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267638 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_001533064 |
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| Protein GI | 159044270 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.20238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAGA AGACACTGAC GCGCATGGAC CTGAGCGATG CGGTATTCCG CGAGGTCGGC
CTGTCCCGGA ACGAATCCGC CCAACTGGTC GAGAGCATCC TGACCCATAT GTCCGACGCA
CTTGTGCGCG GCGAAAGCGT CAAGATCTCG TCCTTCGGGA CCTTCAGCGT GCGCGACAAG
TCCGCCCGGA TCGGGCGCAA CCCCAAGACG GGCGAGGAAG TGCCGATCCA TCCGCGCCGC
GTGCTGACCT TCCGGCCCTC GCATCTGATG AAAGAACGGG TCGCCAATGG AAACCGCAAC
CGATAG
|
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| Protein sequence | MAEKTLTRMD LSDAVFREVG LSRNESAQLV ESILTHMSDA LVRGESVKIS SFGTFSVRDK
SARIGRNPKT GEEVPIHPRR VLTFRPSHLM KERVANGNRN R
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