Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1720 |
Symbol | fabH |
ID | 5713286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1787238 |
End bp | 1788212 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267637 |
Product | 3-oxoacyl-[acyl-carrier-protein] synthase 3 |
Protein accession | YP_001533063 |
Protein GI | 159044269 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.421213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.298986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAC GTGCAGTCGT CACCGGTGTG GGGCATTACC TTCCAAGCCG CGTGGTCCCG AATTCCGAAC TCGAAACCCT GGTCGACACG ACCGATGAAT GGATCCGTAC CCGCTCGGGC ATCGAGCGGC GCCATTTCGC AGCGGACGGG GAACAGACCT CGGACCTTGC CACCGCCGCC GCGCAAGCGG CACTCGACCA TGCCGAGCTG ACCGCACAGG ATGTGGACGC GGTGATCGTG GCGACCTCCA CCCCCGATCT GACCTTCCCG GCCGTGGCCA CCATGGTGCA GGCCCGGCTC GGCATGACCC GGGGGTTTGC CTATGACGTG CAGGCGGTCT GCGCCGGGTT CGTGTTCGCC ATGGCCAATG CCAACGCGAT GATCCTGTCG GGCCAGGCCG ACCGGATCCT GGTGATCGGG GCCGAGACCT TCAGCCGAAT CATGGACTGG ACCGACCGGT CGACCTGCGT GCTCTTCGGC GACGGCGCGG GTGCCGTGGT GCTGGAGGCG CGCGACGGCA CCGGTGGGAC GGCCGACCGC GGGATCCTGT CGGCGGACCT GAATTCCGAC GGGCGGCACC GCGATATCCT TTACGTGGAT GGGGGCGTGT CCAGCTCGCA AACCGCGGGC TACCTGCGGA TGGAGGGCAA GGAAGTGTTC CGCCACGCCA TCGAGAAGCT CGCCGCGACC GCCGAGACCG CGCTCGCCAA GGCCGGTCTG ACAGAGGCGG ATGTGGACTG GGTCGTGCCC CACCAGGCCA ACCTGCGCAT CATCACCGCC ACCGCGCGCA AGATGGGCAT CGGCATGGAC CGGGTCGTCG TCACCGTGGC CGATCACGGC AACACCTCGG CCGCGTCGAT CCCCATGGCG CTGTCGGTCG GGGTGGCGCG CGGGCAGATC AAGCCCGGCG ATCTGGTCGT CACCGAGGCC ATCGGGGGCG GATTGTCCTG GGGATCGGTG GTATTACGCT GGTAA
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Protein sequence | MGKRAVVTGV GHYLPSRVVP NSELETLVDT TDEWIRTRSG IERRHFAADG EQTSDLATAA AQAALDHAEL TAQDVDAVIV ATSTPDLTFP AVATMVQARL GMTRGFAYDV QAVCAGFVFA MANANAMILS GQADRILVIG AETFSRIMDW TDRSTCVLFG DGAGAVVLEA RDGTGGTADR GILSADLNSD GRHRDILYVD GGVSSSQTAG YLRMEGKEVF RHAIEKLAAT AETALAKAGL TEADVDWVVP HQANLRIITA TARKMGIGMD RVVVTVADHG NTSAASIPMA LSVGVARGQI KPGDLVVTEA IGGGLSWGSV VLRW
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