| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1713 |
|---|
| Symbol | purL |
|---|
| ID | 5713279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1779001 |
|---|
| End bp | 1781172 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641267630 |
|---|
| Product | phosphoribosylformylglycinamidine synthase II |
|---|
| Protein accession | YP_001533056 |
|---|
| Protein GI | 159044262 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
|---|
| TIGRFAM ID | [TIGR01736] phosphoribosylformylglycinamidine synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0229678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAT CCATCACCGA GCCTGCCATC ACGCCCGACC TGATCGCCGC CCACGGGCTG
AAGCCCGAAG AATACGCGCG TATCCTGGAG ATCATCGGGC GCGAGCCGAG CTTCACCGAG
CTGGGCATTT TCTCGGCCAT GTGGAACGAG CATTGTTCCT ACAAATCCTC CAAGATCCAT
CTGCGCAAGC TGCCGACCGA GGGGCCTCAG GTCATTTGTG GACCGGGCGA GAACGCGGGT
GTGGTCGATA TCGGCGACGG CCAGGCGGTG GTCTTCAAGA TGGAGAGCCA CAATCACCCT
TCCTATATCG AGCCCTATCA GGGGGCGGCC ACGGGCGTGG GCGGCATCCT GCGCGATGTG
TTCACCATGG GCGCGCGGCC CATCGCGGCG ATGAACGCCC TGAGTTTCGG CGAGGTGTCG
CACCCCAAGA CCCGGTCGCT GGTCGCGGGC GTGGTCGAGG GGATCGGCGG GTATGGCAAC
TGTTTCGGCG TGCCCACGGT GGGCGGCGAG GTGCGGTTTC ATCCGGCCTA TAACGGCAAC
TGCCTGGTCA ACGCCTTTGC CGCGGGGCTC GCGGACGCGG ACAAGATCTT CTACTCGGCG
GCCTCCGGCG TGGGGATGCC GGTGGTCTAT CTTGGCGCCA AGACGGGACG CGACGGGGTC
GGTGGGGCCA CCATGGCCAG TGCGGAGTTC GACGACACCA TCGAGGAGAA GCGCCCCACG
GTGCAGGTGG GCGACCCGTT CACGGAAAAG CGGCTGATGG AGGCTTGCCT GGAGCTGATG
GCCACGGGGG CGGTGATCTC GATCCAGGAC ATGGGGGCGG CGGGGCTGAC CTGTTCGGCG
GTGGAGATGG GCGACAAGGG CGGGCTCGGC ATACGGCTGG ACCTTGAGAA GGTGCCGGTG
CGCGAGACCG CCATGACCGC CTACGAGATG ATGCTGTCGG AGAGCCAGGA GCGCATGCTC
ATGGTGCTGA ACCCGGCGTT GGAGGCCGAG GCCAAGGCGG TGTTCGACAA GTGGGACCTG
GATTTCGCCA TCGTGGGCGA GACGATTGCC GAGGACCGGT TCCTGATCGT GCATCACGGC
GAGACCAAGG CGGACCTGCC CCTGTCGAAA CTTGCATCGA GCGCGCCGGA ATACGACCGG
CCCTGGGTGC CGACGCCCGA GGCCGCGCCG CTCGACCCGG TGCCCGCGGT GGACCCGATC
GACGGGCTCA AGGCGCTGCT GGCCAGCCCC AACTATGCGC GCAAGCACTG GGTCTGGGAG
CAGTACGACA CACAGGTCAT GGCCGACACG CTGCGCACGC CCGGTCTTGG CGCGGGGATC
GTGCGGGTGC ACGGGACCGA CAAGGCGTTG GCCTTCACCA GCGATGTGAC CCCGCGCTAC
GTGCGGGCGA ACCCGGTGCA GGGCGGGCGG CAGGCGGTGG CGGAGGCCTA TCGCAACTTG
ATCGCGGTGG GGGCGCGTCC GCTTGCGACC ACCGACAACC TGAATTTCGG CAACCCCGAA
AAACCCGAGA TCATGGGCCA GTTCGTCGGC GCGTTGCAGG GGATCGGGGA GGCCTGCGCG
GCGCTCGACA TGCCGATCGT GTCGGGCAAT GTCAGCCTGT ATAACGAAAC CGACGGTCAG
GGCATCCTGC CGACGCCCAC CATCGGGGCG GTGGGGCTCA TCGACCATGT GGACGAGGCC
ATCATGGGCC AGCCCCGGGC GGGGGATATT TTGCTGCTGA TCGGGGCGGG CGAGGGGCAT
CTGGGCCAAT CGGCGCTGCT GGCCGAGGTG TTCAACCGCG AGGAGGGCGA TGCGCCGCCT
GTGGACCTGG ACGCCGAGCG CGCGGCGGGC GAGCTGATTC TCGAGGTGCG GGAGTGGATC
GGGGCCTGTA CGGACCTGTC GGATGGCGGG CTGGCGCTCG CGGCGTTCGA GATGGCGGAG
GCGGCCGGGC TCGGCGTCAG CCTGGACGAG GCGGACATGG CGCAGCTGTT CGGGGAGGAC
CAGGGGCGTT ACATCGTGGC CTGCGGGTTC GATGCGGCCG AGGCGATCAT GGTCGCGGCG
GGGCGGGCGG GCGTGCCCGT GGCCAGCGTC GGCCGGTTCG GCGGCGAGCA GGTGAGCCTC
GGCGCCAGCA GCGCGCCGCT TGCGGAGTTG AGCACGCTCT ATCGTGGTGC CTTTGCCGCG
CAACTGGGCT GA
|
|---|
| Protein sequence | MPASITEPAI TPDLIAAHGL KPEEYARILE IIGREPSFTE LGIFSAMWNE HCSYKSSKIH
LRKLPTEGPQ VICGPGENAG VVDIGDGQAV VFKMESHNHP SYIEPYQGAA TGVGGILRDV
FTMGARPIAA MNALSFGEVS HPKTRSLVAG VVEGIGGYGN CFGVPTVGGE VRFHPAYNGN
CLVNAFAAGL ADADKIFYSA ASGVGMPVVY LGAKTGRDGV GGATMASAEF DDTIEEKRPT
VQVGDPFTEK RLMEACLELM ATGAVISIQD MGAAGLTCSA VEMGDKGGLG IRLDLEKVPV
RETAMTAYEM MLSESQERML MVLNPALEAE AKAVFDKWDL DFAIVGETIA EDRFLIVHHG
ETKADLPLSK LASSAPEYDR PWVPTPEAAP LDPVPAVDPI DGLKALLASP NYARKHWVWE
QYDTQVMADT LRTPGLGAGI VRVHGTDKAL AFTSDVTPRY VRANPVQGGR QAVAEAYRNL
IAVGARPLAT TDNLNFGNPE KPEIMGQFVG ALQGIGEACA ALDMPIVSGN VSLYNETDGQ
GILPTPTIGA VGLIDHVDEA IMGQPRAGDI LLLIGAGEGH LGQSALLAEV FNREEGDAPP
VDLDAERAAG ELILEVREWI GACTDLSDGG LALAAFEMAE AAGLGVSLDE ADMAQLFGED
QGRYIVACGF DAAEAIMVAA GRAGVPVASV GRFGGEQVSL GASSAPLAEL STLYRGAFAA
QLG
|
|---|
| |