Gene Dshi_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1710 
Symbol 
ID5713276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1778048 
End bp1778410 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content57% 
IMG OID641267627 
Productputative monothiol glutaredoxin 
Protein accessionYP_001533053 
Protein GI159044259 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0700819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG CAAACGAGCG TATCAAGGAG ACCGTGACCA AGAACGATGT TGTTCTGTTC 
ATGAAGGGCA CCAAGACAAT GCCGCAATGC GGATTCTCGA GCCGGGTGGC CGGGGTTCTG
AATTTCATGG GGGTCGAATA CACGGATGTG AACGTGCTGG CGGACGAGGA AATCCGGCAG
GGGATCAAGG ACTATTCCGA CTGGCCGACC ATCCCGCAGC TTTACGTCAA GGGCGAGTTC
GTCGGCGGCT GCGATATCAT CACCGAGATG ACCCTGTCGG GCGAACTGGA CCAGATGTTC
GAGACCAACG CGGTGTCCTA CAACAAGGAA GCCGCCGACA AGATCCGCGA AGCCAACGCC
TGA
 
Protein sequence
MSDANERIKE TVTKNDVVLF MKGTKTMPQC GFSSRVAGVL NFMGVEYTDV NVLADEEIRQ 
GIKDYSDWPT IPQLYVKGEF VGGCDIITEM TLSGELDQMF ETNAVSYNKE AADKIREANA