Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1704 |
Symbol | |
ID | 5713270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1772514 |
End bp | 1773584 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267621 |
Product | putative high-affinity zinc uptake system protein |
Protein accession | YP_001533047 |
Protein GI | 159044253 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0200273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0153509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAGAA ACCTGACCAC TCTCTGCGTT GCAACCACCC TGCTTGGTGG CACCGCCCTG GCGGATGTGC CGACCGTGGC CACCGACATC GCGCCGGTCC ACGCCCTCGT GGCCCGCGTC ATGGACGGCG TCGGCACCCC CACCCTGATC CTGCCCCCCG GCGCCTCGCC CCATGAATAC AGCCTGCGCC CGTCCGAGGC CGCCGCGTTG CAGGACGCCG ACCTCGTGTT CTGGATGGGC GCGGACCTCG CCCCCTGGAT GGAAGACGCC GTCGCGACCC TCGCCACCAA CGCCCGTGTC ACGACCCTGC TGGACGCCGA AGAGACCACC CTGCTGCCCT TCCGCGAGGG CGCCCTGTTC GAAGCCCACG ATCATGATCA TGGCGACGAG GAGCATGACC ACGCGAGCCA TGACCATGAC CATGACCATG ACCACGCGGA ACATGATAAC GCGCACGACC ACGACCATGA TCACACGCAC GACTCTTCGG AAAAGGCCGC CAGCCACGAT CACGCCCATG ACGATCACGA CCACGAAACC CACGCCGGCC ACGACCACGG CGAACACGAC CCCCATGCCT GGCTCTCGCC GCAGAACGCC GCGGCCTGGC TGACCCTGAT CGCCACACAA CTCTCCACCG CCGACCCGGA CAACGCCGCG ACCTACTTCA CCAACGCCAC CGAGGGCCGC ACCGAACTCG ACGCCCTCTC GGCAGAGGTG GCAGAGATCC TCGCCCCCGC CCGCGGCGGC AGCTTCATCG TCTTCCACGA CGCCTACCAG TATTTCGAAA CCGCCTTCGA CTTCCCCGCC TCCGGAGCGA TCTCGCTCAG CGACGCTACC GATCCCAGCC CCGCCCGCAT CGCCGAGATC CGCGACCGGG TCCGGGACGA GGGGATTACC TGCGTGCTGG CCGAGCCGCA ATTCAACGCC GGGCTGGTGG ACACCGTGCT CGACGGCACC GAGGCCAGAA CCGGCGTGAT CGACCCGATC GGGATCGACC TCACGCCCGG CCCCGACCTC TATCCGCAGC TGATCCGCAA CATGGCCACG ACGCTCGCGG GCTGCCTCTG A
|
Protein sequence | MSRNLTTLCV ATTLLGGTAL ADVPTVATDI APVHALVARV MDGVGTPTLI LPPGASPHEY SLRPSEAAAL QDADLVFWMG ADLAPWMEDA VATLATNARV TTLLDAEETT LLPFREGALF EAHDHDHGDE EHDHASHDHD HDHDHAEHDN AHDHDHDHTH DSSEKAASHD HAHDDHDHET HAGHDHGEHD PHAWLSPQNA AAWLTLIATQ LSTADPDNAA TYFTNATEGR TELDALSAEV AEILAPARGG SFIVFHDAYQ YFETAFDFPA SGAISLSDAT DPSPARIAEI RDRVRDEGIT CVLAEPQFNA GLVDTVLDGT EARTGVIDPI GIDLTPGPDL YPQLIRNMAT TLAGCL
|
| |