Gene Dshi_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1641 
Symbol 
ID5713206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1701587 
End bp1701880 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content63% 
IMG OID641267557 
Producthypothetical protein 
Protein accessionYP_001532984 
Protein GI159044190 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.825876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000000345307 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGCTT TCTGGATCGC ACATGTGCAC GTCACAGACG CAGACCGTTA CGGCGAATAC 
GCCAAGCGCG CCACGGTCGC CATTGCGGAA CACGGCGGGC AGTTTCTCGC CCGGGGCGGT
GGTTTCACGC AATTGGAGGG GCCTGAGCGC GAACGCCACG TTGTCGTGCG CTTCGAGAGC
CGCGCGCAGG CTGAAAAATG CTATGCCTCT TCAGCCTACC AAGAAGCCCT CAGCTACGCG
CGTGGCGCGG CCGAGCGCGA ACTCGTGATC GTGGACGCGC TCGACGATAC CTGA
 
Protein sequence
MSAFWIAHVH VTDADRYGEY AKRATVAIAE HGGQFLARGG GFTQLEGPER ERHVVVRFES 
RAQAEKCYAS SAYQEALSYA RGAAERELVI VDALDDT