| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1633 |
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| Symbol | iscR |
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| ID | 5712778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1697195 |
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| End bp | 1697683 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267549 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_001532976 |
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| Protein GI | 159044182 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.710351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000183112 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAAACTCA GTACCAAGGG CCGCTACGCG ATGGTGGCGA TGGCCGATCT GGCCGAAGCC
CCGGCCGACA AGCTTGTGAC GTTGTCGGAG ATTGCCGAGC GGCAAAGTAT CTCTCTGACG
TATCTCGAAC AGCTCTTCGT CAAGCTGCGT CGGGCAAAGC TGGTCGAGTC CGTGCGCGGG
CCCGGCGGAG GGTATCGGCT GGCACGGGCG CCGGATGCCA TCCGCGTATC GGATGTCCTG
CAGGCCGTGG ACGAAACGGT CAGTGCCATG CATACCGGGG CGGGGGCGTC CGGTGCCAAG
TCCGGCTCAC GGGCGCAGTC GATGACCAAC CGGCTCTGGG AAGGGTTGAG CGCGCATGTC
TATGTGTTTC TACATCAGAC CCGCTTGTCT GACGTGGTGA CCAACCAGCT GACGCCATGC
CCGGCGGTAC CGACGCTGTT CACCGTTGTC GACGATGTGG TCGACGATGC AGACGCAGTT
GCGAACTGA
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| Protein sequence | MKLSTKGRYA MVAMADLAEA PADKLVTLSE IAERQSISLT YLEQLFVKLR RAKLVESVRG
PGGGYRLARA PDAIRVSDVL QAVDETVSAM HTGAGASGAK SGSRAQSMTN RLWEGLSAHV
YVFLHQTRLS DVVTNQLTPC PAVPTLFTVV DDVVDDADAV AN
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