| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1627 |
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| Symbol | sufC |
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| ID | 5712772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1692553 |
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| End bp | 1693308 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641267543 |
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| Product | ATP-dependent transporter |
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| Protein accession | YP_001532970 |
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| Protein GI | 159044176 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
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| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.593965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00197674 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCAAA TCAAAAACCT GCACGTGAAA CTTGAAGAAG AGGACAAGCA GATCCTCAAG
GGTGTCGACC TGAGCGTGGA GCCGGGCAAG GTTCATGCGA TCATGGGACC GAACGGGTCG
GGCAAGTCGA CTCTGTCTTA CGTCCTGTCG GGGCGTGACG GCTACGAGGT CACCGAGGGC
AGCGCCACGC TGCTGGGCGA GGACATCCTC GACATGGAGC CCGAAGAGCG CGCGGCCGCT
GGTCTCTTTC TGGCATTCCA GTACCCGGTG GAAATCCCGG GCGTGGGCAA CATGACATTT
TTGCGCACCG CGGTGAACGC GCAGCGCAAG GCGCGCGGCG AGGACGAATT GTCGGCCGCC
GATTTCCTCA AGGAGGTGCG TGCCAAGGCC AAAGCATTGA AGATCGATGC AGACATGCTC
AAGCGTCCGG TCAATGTCGG CTTCTCGGGC GGTGAGAAGA AACGCAACGA GATCCTGCAG
ATGGCCATGC TGGAGCCGAA GATGTGCATT CTCGACGAGA CCGACTCCGG TCTTGATGTG
GATGCAATGA AACTCGTGGC GGAGGGCGTG AATGCCCTGC GATCCGAGGG GCGGTCCTTC
CTCGTGATCA CGCACTACCA GCGCCTGTTG GATCACATCA AACCGGACGT TGTCCACATC
ATGGCGGATG GCAGGATTAT CAAGACCGGT GGGCCCGAAC TGGCTCTCGA GGTAGAGAAC
AACGGCTATG CCGACCTGTT GGCCGAGGTA GCGTAA
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| Protein sequence | MLQIKNLHVK LEEEDKQILK GVDLSVEPGK VHAIMGPNGS GKSTLSYVLS GRDGYEVTEG
SATLLGEDIL DMEPEERAAA GLFLAFQYPV EIPGVGNMTF LRTAVNAQRK ARGEDELSAA
DFLKEVRAKA KALKIDADML KRPVNVGFSG GEKKRNEILQ MAMLEPKMCI LDETDSGLDV
DAMKLVAEGV NALRSEGRSF LVITHYQRLL DHIKPDVVHI MADGRIIKTG GPELALEVEN
NGYADLLAEV A
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